Oryza sativa japonica (Japanese rice): 4347019
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Entry
4347019 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4347019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4347019
Spliceosome [BR:
osa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
4347019
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
SF3a60_bindingd
Motif
Other DBs
NCBI-GeneID:
4347019
NCBI-ProteinID:
XP_015611814
UniProt:
Q69MX3
A0A0P0XLM2
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All DBs
Position
9:complement(join(18772756..18772849,18772941..18773112,18773193..18773364,18773915..18774109,18774184..18774351,18774448..18774633,18775095..18775179,18775260..18775504,18776520..18776867))
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AA seq
554 aa
AA seq
DB search
MAADDLSSPARKRGRDEEEEEEEEVIDGEAAQKRARGEDPEGGALLGLANYEEDEEDEEA
AAAAGRRRANGRHEEEEEEDDDDDEVDNDVRRAPERRPRQVELRRDCPYLDTVNRQVLDF
DFEKFCSISLSNLNVYACLVCGKYYQGRGLKSHAYTHSLEAGHHVFINLQTEKAYCLPDG
YEINDPSLEDIRHVLNPRFTTEQVRNLDRNKQWSRALDGSNYLPGMVGLNNIKETDFVNV
TIQSLMRITPLRNFFLIPENYRHSKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMK
ASDKRFQIGVQSDPVEFMSWLLNTMHSKLKSRKRNRSIIHDCFQGELEVVKEFHKKHIVE
KKEDGDEQNGDAGSDIVTETSRVPFLMLGLDLPPPPLFKDAMEKNIIPQVPLFNILKKFD
GETVTEVVRPSIARMRYRVIRLPKYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI
PLPKPKDSEKLRSKYDLIANVVHDGKPGEGCYRVFVQRKSEEAWYEMQDLHVTETLPQMV
ALSEAYMQIYEQHE
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggacgatctctcatccccggcgcggaagcgcggccgcgacgaggaggaggag
gaggaggaggaggtcatcgacggggaggccgcccagaagcgcgcgcgcggggaggatccg
gagggcggggcgctgctggggctcgccaactacgaggaggacgaggaggacgaggaggcg
gcggctgctgcggggaggcgccgcgcgaatggccgacacgaggaagaggaggaggaggac
gacgacgacgacgaggttgacaacgacgtgaggagggctccggagcggaggccgaggcaa
gtggagctgcgccgggactgcccttacctcgacaccgtgaaccgccaggtccttgatttt
gattttgagaagttctgctcaatctccttatcaaacttgaacgtgtatgcatgtttggtt
tgtggaaagtattaccaaggaagaggcttgaaatcacatgcatatactcacagccttgaa
gcaggccaccatgtgttcattaaccttcaaactgagaaagcttactgtcttcctgatgga
tatgagataaatgatccatcattggaagatattcgacatgttctcaacccaaggtttaca
acagagcaggttcgtaatcttgataggaacaagcagtggtctagagctcttgatggctcc
aattatctacctggaatggttggtctaaacaacatcaaggagacagattttgtgaatgtc
acaatacagtcattaatgagaattactcctttaagaaatttctttctcatccctgaaaat
tatcggcatagcaaatccccattggttcatcgatttggagaactaactcgcaaaatctgg
catgcaaggaacttcaagggccaggttagtccacatgagtttctgcaagcagttatgaag
gccagtgataagaggttccagattggtgttcagtctgatccagtggaatttatgtcatgg
ctcttgaacacaatgcactcgaaactaaaaagtaggaagagaaacagaagcatcatacat
gattgctttcagggagaacttgaagtagttaaggaatttcacaagaagcatattgtggaa
aagaaagaggacggcgatgaacagaatggtgatgcaggttcagatattgttactgaaaca
tctagggtcccatttttgatgcttggccttgacctaccacctccacctcttttcaaggac
gccatggagaaaaatatcattccacaggtaccactctttaatatattgaagaagtttgat
ggcgagacagttacagaggtagtgcgaccctccattgctcgtatgaggtatcgagtcatc
agacttccaaagtatctgatccttcacatgcgacggtttaccaaaaataacttctttgta
gagaagaatcctactctagtgaatttccccgtgaagaacttggaattgaaagattacatc
ccattacctaagccaaaagattccgagaagctacgctcaaagtatgatctcatagccaac
gttgtccatgatggcaagccaggcgagggatgttacagagtatttgtacagcggaaatca
gaagaggcttggtatgaaatgcaagatcttcatgttaccgagactcttcctcagatggta
gctctttcagaagcctacatgcaaatatacgagcagcacgaatga
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