Oryza sativa japonica (Japanese rice): 4347089
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Entry
4347089 CDS
T01015
Name
(RefSeq) phospholipase D alpha 1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00564
Glycerophospholipid metabolism
osa00565
Ether lipid metabolism
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
4347089
00565 Ether lipid metabolism
4347089
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4347089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4347089
Enzymes [BR:
osa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
4347089
Membrane trafficking [BR:
osa04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
4347089
Endosome - Golgi transport
Others
Others
4347089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLD_C
PLDc
PLDc_2
C2
Motif
Other DBs
NCBI-GeneID:
4347089
NCBI-ProteinID:
XP_066160482
LinkDB
All DBs
Position
9:complement(join(19601139..19601587,19601667..19603566,19604507..19604611))
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AA seq
817 aa
AA seq
DB search
MGSRGAAADHLHGVLELTVYEADDLHNAIHGRIIKAAESLKESLGVHRLAHRIYVDVDVG
AARVARTREVEFHPTNPVWNQSFRLHCAYPAAPVAFTVKSQHLVGAGVLGAARVPAARVA
TGEPVEGWLDLRGGEHGHATHTPKLRVRLRFLGVESDPWWDAGVRLPGFAGVTPAFFPER
SGCRVTLYQNSHLSGGFDPGVRLAGGGAYRPARLWEDMYVAIRDARRFVYVAGWSVNADI
TLVRDASRMVPGAEGVTLGELLRRKADEGVAVLVMPWQDKTSVSFLGNGGLMRTHDEETR
RFFEGTNVRCFLCPRNADASLTMVQSIEVAAEFTHHQKTVTLDAAAASPGDADGSRRHIV
SFIGGIDLCDGRYDDENHTLFRDLDTTYRHDFMQNNFKHAGLRRGGPREPWHDVHCRLEG
RAAWDVLANFEQRWRKQAPPEMAGCLLDLSQAELPDPGSFGDDEPWNVQVFRSIDDASVV
GFPAEPVAAAAMGLTNGKDVTIDRSIQAGYVEAIRRARRFIYVENQYFLGGCASWAEDRD
AGCLNLVPVEIALKVAAKIRRGERFAAYVVTPMWPEGEPAGDSVQAILRWNRLTVEMMYG
IVTKAIDDAGLRGQAHPCDYLNFFCLGNREAPRPGEYSPPETPDVDTDYWRAQVNRRFPI
YVHAKLMIVDDEYVMVGSANLNERSLAGNRDSEIAQGSYQPAHLNGGPSGRARGLVHAFR
MSLWHEHLMGHAGGGGGVFLEPESAECVRAVRRAAEATWDAYTRDTMEDLLGHLLPFPIT
VSEFGEVADLTADGCFPDTTAPVKGRRSLKLPAILTT
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgggctctcgtggcgccgccgccgaccatctccacggcgtcctcgaactgacggtgtac
gaggccgacgacctccacaacgccatccatggccggatcatcaaggcggcggagagcttg
aaggagtcactgggcgtgcaccgtctggcacacaggatctacgtcgacgtcgatgtcggc
gcggcgagggtggcgcgcacccgcgaggtggagttccacccgaccaaccccgtctggaac
cagtcgttccgcctccactgcgcctacccggcggcgcccgtggcgttcaccgtcaagagc
cagcacctcgtcggcgccggcgtcctcggcgccgcgcgcgtgccagccgcgcgcgtcgcc
acgggtgagcccgtggagggctggctcgacctccgcggcggtgagcatggccacgcgacg
cacaccccgaagctccgcgtccggctgcggttcttgggcgtggagtccgacccgtggtgg
gacgccggcgttcgcctccccgggttcgccggcgtcacgccggcgttcttcccggagagg
agcggctgccgcgtgacgctgtaccagaactcgcacctgtccggcgggttcgacccgggc
gtccgcctcgccggcgggggggcgtaccggccggcgcgcctgtgggaggacatgtacgtc
gccatccgcgacgcgcggcggttcgtgtacgtcgccgggtggtcggtgaacgcggatatc
acgctggtgcgcgacgcgtcccggatggtccccggcgccgagggcgtcacgctgggcgag
ctgctgcggcggaaggccgacgagggggtggccgtgctggtgatgccgtggcaggacaag
acgtccgtctccttcctcggcaacgggggcctcatgaggacacacgacgaggagacgcgg
cgcttcttcgagggcaccaacgtgcgctgcttcctctgcccgcgcaacgccgacgcgtcg
ctcaccatggtgcagagcatcgaggtcgcagcggagttcacgcaccaccagaagacggtc
accctcgacgccgccgccgcctcgccgggcgacgcggacggcagccgtcgccatatcgtc
agcttcatcggcgggatagacctctgcgacggccggtacgacgacgagaaccacacgctg
ttccgggacctcgacaccacgtaccgccatgacttcatgcagaacaacttcaagcacgcc
ggcctgcggcgcggcgggccgcgggagccgtggcacgacgtccactgcaggctcgagggc
cgcgcggcgtgggacgtgctcgccaacttcgagcagcggtggaggaagcaggcgccgccg
gagatggccggctgtctgctcgaccttagccaggcggagctccctgaccccggcagcttc
ggcgacgacgagccgtggaacgtgcaggtgttccggtccatcgacgacgcgtcggtcgtc
gggttccccgccgagccggtggcggcggcggcgatgggcctgacgaacggcaaggacgtc
acgatcgaccggagcatacaggccggctacgtcgaggccatccgccgggcgcggcggttc
atctacgtcgagaaccagtacttcctcggcggctgcgcgtcgtgggccgaggaccgcgac
gccggctgcctcaacctggtgcccgtcgagatcgcgctcaaggtcgccgccaagatccgg
cggggcgagcggttcgcggcgtacgtcgtgacgccgatgtggccggagggcgagccggcc
ggcgactccgtccaggccatcctccggtggaaccggctcaccgtggagatgatgtacggc
atcgtcacgaaggccatcgacgacgccgggctgcgcggccaggcgcacccctgcgactac
ctcaacttcttctgcctcgggaaccgggaggcgccgcgccccggcgagtactcgccgccg
gagacgccggacgttgacacggactactggcgcgcgcaggtgaaccgccggttccccatc
tacgtgcacgccaagctcatgatcgtggacgacgagtacgtcatggtcggctcggcgaac
ctcaacgagcggtcgctggccggcaaccgggacagcgagatcgcgcaggggagctaccag
ccggcgcacctgaacggcggcccgagcggccgcgcgcgcgggctcgtgcacgcgttccgg
atgtcgctgtggcacgagcacctcatgggccacgccggcggcggcggcggcgtgttcctg
gagccggagagcgcggagtgcgtgcgcgcggtgcggcgagcggcggaggcgacgtgggac
gcgtacacgcgggacacgatggaggacctgctggggcacctgctgccgttcccgatcacc
gtgtccgagttcggcgaggtggccgacctgacggccgacgggtgcttcccggacacgacg
gcgccggtgaaggggaggaggtcgttgaagcttcccgccattctgaccacgtga
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