Oryza sativa japonica (Japanese rice): 4347232
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Entry
4347232 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4347232
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4347232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4347232
04121 Ubiquitin system [BR:
osa04121
]
4347232
Ribosome [BR:
osa03011
]
Ribosomal proteins
Eukaryotes
Large subunit
4347232
Archaea
4347232
Ubiquitin system [BR:
osa04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
4347232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
zf-C4pol
Rad60-SLD_2
TBK1_ULD
DUF2604
UBL_UBAC1
Ubiquitin_5
Plexin_RBD
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
4347232
NCBI-ProteinID:
XP_015612663
UniProt:
A3BZG4
A0A0N7KQX0
LinkDB
All DBs
Position
9:join(21354492..21354594,21355504..21355714,21355837..21355903,21356126..21356167)
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AA seq
140 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGSRGGYPKGIEPNLRELAQKYNENKLVCRRCYARLPLRSTNCRKK
KCGHSNEIRAKKRFMSKLSK
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagacgctcaccgggaagacgatcacgctggaggtggagagcagc
gacaccatcgacaacgtcaaggccaagatccaggacaaggaaggtatcccgccggaccag
cagcgtctcatcttcgcggggaagcagctcgaggatggccgcaccctggccgactacaac
attcagaaggagtcgacgcttcacctggtgctccgcctccgcggtggcagcaggggcggc
taccccaaggggatcgagcccaacctccgcgagctcgcgcagaagtacaacgagaacaag
ctggtttgccgcaggtgctatgcacgccttcccctcaggtccaccaactgccgcaagaag
aagtgtggccacagcaatgagataagggcaaagaagaggtttatgtccaagctttcgaag
tga
DBGET
integrated database retrieval system
