Oryza sativa japonica (Japanese rice): 4347265
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Entry
4347265 CDS
T01015
Name
(RefSeq) alpha-amylase isozyme 3C isoform X1
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00500
Starch and sucrose metabolism
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
4347265
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
4347265
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
4347265
NCBI-ProteinID:
XP_066160303
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Position
9:join(21685925..21686017,21686140..21687450)
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AA seq
467 aa
AA seq
DB search
MAKHSTTMSCLLFFVLLCLGSHLAQAQVLFQGFNWESWKKQGGWYNFLHSHVDDIAATGV
THVWLPPPSHSVAPQGYMPGRLYDLDASKYGTGAELRSLIAAFHSKSIKCVADIVINHRC
ADYKDSRGIYCIFEGGTPDSRLDWGPDMICSDDTQYSNGRGHRDTGADFGAAPDIDHLNT
RVQTELSDWLNWLKSDVGFDGWRLDFAKGYSATVAKTYVDNTDPSFVVAEIWSNMRYDGN
GEPSWNQDGDRQELVNWAQAVGGPASAFDFTTKGELQAAVQGELWRMKDGNGKAPGMIGW
LPEKAVTFIDNHDTGSTQNSWPFPSDKVMQGYAYILTHPGVPCIVSAQLDNLHRYQKSIF
VNHNLELTFRLSVQFYDHVFDWNLKQEISTLAAVRSRNGIHPGSKLNILAADGDVYVAMI
DDKVITKIGTRYDVGNLIPSDFHVVAHGNNYCVWEKSGLRVPAGRRH
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcattccaccacaatgagctgcctcctattcttcgtcttgctctgtttgggc
tctcacttagcccaggctcaggttctctttcagggattcaactgggagtcatggaagaag
cagggtgggtggtacaacttcctccatagccacgtcgacgacatcgccgcgaccggagtc
acacacgtctggctcccgccgccgtcgcactccgtcgcgccacagggatacatgccggga
cggctctacgacctggacgcgtccaagtacgggacgggggcagagctcaggtcgctgatc
gccgccttccacagcaagagcatcaagtgcgtcgccgacatcgtcatcaaccaccggtgc
gcggattacaaggatagccgtggcatctactgcatcttcgagggtggcacgccggacagc
cgcctcgactggggtcccgacatgatctgcagcgacgacacgcagtactccaacggccgc
ggtcaccgcgatactggcgcagacttcggcgcggcgcccgacatcgaccacctcaacacg
cgtgtgcagacagagctctccgactggctcaactggctcaagtccgacgtcggcttcgac
ggctggcgcctcgacttcgccaagggatactcggcgaccgtcgccaagacgtacgtggac
aacaccgacccgtccttcgtcgtcgccgagatatggagcaacatgcgttacgacggcaac
ggtgagccgtcgtggaaccaggacggtgaccggcaggagttggtgaactgggcgcaggcc
gtcggtggccctgcatcggcgttcgacttcacgaccaagggcgagctgcaggcagcggtg
caaggtgagctgtggcggatgaaggatggcaacggcaaggcgccggggatgattggctgg
ctgccggagaaggctgtcaccttcatcgacaatcatgacactggctccacacagaactca
tggccgttcccctccgacaaggtcatgcagggctacgcctacatcctcacacaccctgga
gtaccctgcattgtgagtgctcagcttgataatctccatcgctatcagaaatcgatattt
gttaaccataatctcgaactaacattccgtctgtctgtacagttctacgaccatgtgttt
gactggaacttgaagcaggagatcagcacattggccgcggtgaggtcaagaaatggaatt
catcctgggagcaagctgaacatccttgctgctgacggagatgtctacgtcgccatgatc
gatgacaaggtgatcacaaagattgggactcggtatgatgtgggcaacttgatcccgtca
gacttccatgtcgttgctcacggcaacaattactgcgtctgggaaaagagtggtcttaga
gttccagcagggcggcgccactag
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