KEGG   Oryza sativa japonica (Japanese rice): 4347374
Entry
4347374           CDS       T01015                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
  KO
K16285  RING/U-box domain-containing protein [EC:2.3.2.27]
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    4347374
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     4347374
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    4347374
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-rbx1 zf-RING_16 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 Prok-RING_4 zf-ANAPC11 zf-C3HC4_4 RINGv Prok-RING_1 zf_RING_Vps8 FANCL_C zf-Nse zf-RING_Vps41 DUF7520 zf-RING_4 zf_RING_Vps8_fungal zf-Vps39_C PHD_NSD Xre_MbcA_ParS-like_N
Other DBs
NCBI-GeneID: 4347374
NCBI-ProteinID: XP_015612164
LinkDB
Position
9:complement(22735724..22736221)
AA seq 165 aa
MGISSMPAPKDSLVLYVLYNAVVSVAALAGVVRAALVFLGLPTPPSLLLLLGGEEGGEDA
AVAVSVSAAAAAAGPSLADTFRARFRPARFGHRRCGGGATADCRVCLVRFEAEAVVNRLP
CGHIFHRACLETWLDYDHATCPLCRSRLLADSSSPPAAAAALART
NT seq 498 nt   +upstreamnt  +downstreamnt
atggggatctccagcatgccggcgccgaaggatagcctcgtgctgtacgtgctgtacaac
gcggtggtgtcggtggcggcgctggccggcgtggtgcgggcggcgctggtgttcctgggg
ctccccacgccgccgtcgctgctgctgctgctcggcggcgaggaagggggggaggacgcg
gccgtggccgtgtcggtctccgcggcggcggcggcggcggggcccagcctggcggacacg
ttcagggcgaggttccgaccggcgcggttcggccaccggcgctgcggcggcggcgcgacg
gcggactgccgcgtctgcctggtgcggttcgaggcggaggcggtggtgaaccgcctcccc
tgcggtcacatcttccaccgcgcctgcctcgagacatggcttgactacgaccacgccacc
tgcccgctctgccgctcccgcctcctcgccgactcctcctcgccgccggccgccgccgcc
gccttggcccggacttag

DBGET integrated database retrieval system