Oryza sativa japonica (Japanese rice): 4347411
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Entry
4347411 CDS
T01015
Name
(RefSeq) uncharacterized protein isoform X1
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4347411
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4347411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4347411
04121 Ubiquitin system [BR:
osa04121
]
4347411
Ribosome [BR:
osa03011
]
Ribosomal proteins
Eukaryotes
Large subunit
4347411
Archaea
4347411
Ubiquitin system [BR:
osa04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
4347411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Ribosomal_L40e
UBL_UBAC1
TBK1_ULD
Plexin_RBD
Rad60-SLD_2
Ubiquitin_5
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
4347411
NCBI-ProteinID:
XP_025875918
LinkDB
All DBs
Position
9:join(23064900..23065152,23066227..23066423,23066552..23066618,23067026..23067096)
Genome browser
AA seq
195 aa
AA seq
DB search
MGYFAFVAAAFPRPYIRAGDHDCGAAHHSTTTTTTPPIGESAGRSFDGGKMQIFVKTLTG
KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLV
LRLRGGSRGGYTIQEPTLRALALKYREKKKVLCTPSHQVSPLPQEEVWPQQGAEVEEEVH
QLAFDSVRHWKVFTS
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgggatatttcgctttcgtggcggctgcgtttcctcgcccatatataagagcgggtgac
cacgactgcggcgcggcgcaccactccaccaccaccaccaccactccaccgatcggcgag
agcgcggggagatcgttcgacggcggcaagatgcagatcttcgtgaagacgctgacgggg
aagacgatcacgctggaggtggagagcagcgacaccatcgacaacgtcaaggccaagatc
caggacaaggaaggtatcccgccggaccagcagcgcctcatcttcgccgggaagcagctg
gatgacggccgcaccctggccgactacaacatccagaaggagtcgacgctgcacctggtg
ctccgcctccgcggcggcagcaggggcggctacaccatccaggagcccaccctccgggct
cttgcgctcaagtacagagagaagaagaaggtgctatgcacgccttcccatcaggtctca
ccactgccgcaagaagaagtgtggccacagcaaggagctgaggttgaagaagaagttcat
caactcgctttcgatagcgtgaggcactggaaagtgttcaccagctga
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integrated database retrieval system
