Oryza sativa japonica (Japanese rice): 4347460
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Entry
4347460 CDS
T01015
Name
(RefSeq) pumilio homolog 5
KO
K17943
pumilio RNA-binding family
Organism
osa
Oryza sativa japonica (Japanese rice)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
4347460
NCBI-ProteinID:
XP_015612276
UniProt:
Q0J0J6
A0A8J8XWL1
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All DBs
Position
9:complement(join(23631661..23631707,23631814..23631985,23632365..23632559,23632752..23632862,23632946..23633158,23633955..23634062,23634236..23634377,23634474..23635822,23636553..23637182))
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AA seq
988 aa
AA seq
DB search
MATESARPLSGGTGAGKWPPSKDTGSYDSIPASLSEDELAELAFMPNSGGIFGKWRGSVL
ERSGSAPPTMEGSLVALGHLTGQPSGNLGAILPNLGTEANNSESKENIYYDSACVKYYMS
KVNLNPRFPPPLVSRNQFGKSEERKPFSLDDSSSRSLLLGHPTLPTHKEEPEDEKSPSLD
SSSADDAQCDSAQSTSNLGGHSPNLVDSIKENFHRSNGLYDNSSDLLNANSGDGGSIYSG
ISSLKNSSLYVVQSSDLNGFPPDAHQRSPRPIRTPVSTKLTSDSLPASSPPTSSCSDYST
ITEACQQRNPSMAVKPGEPVGTMLDSSDFSLKNLNISPDILSSSYVMQQWQKNAPVWNGL
SNVVHGDHVPMIPPGINLPQVPFVDNSGFGHMKFPGDVQLMSQIGMATPFCTPNSFGIPC
YPNLQSPSVWVPPFGIGGYGLPGPFVPPVITNFTPQLPGFPSAVNLAAATDLFHPYKMYE
HLGVPMPSPVPDQSLTHYFQQPPIHPYGVGNPYDTMVSSNNFVGNPAGVFGSPIIDPSEQ
KFQIPVTTVAANASTPIKGGKPIGNYETASPYFGVPMPYPAGPTLHGQPASGTSPRDKRN
DVKGFQPPRKNMPVSSEIQGQKGREKFDDPKAHFSVEELISSRTHRVELADIKGQIVKYS
SDQNGSRFIQQKLENCTIEEKDLLFAEVLPHALELMTDVFGNYVIQKFFEKGSPQQKREI
ANKLAGHVFSLSLQMYGCRVIQKALEVIDLEQKIVLVGELDGHVLRCVHDQNGNHVIQKC
IECIPLEHIGFLVSSFQCQVAKLSMHTYGCRVIQRILERCSNNSECLCIIDEILQSACIL
AQDQYGNYVVQHVLEKGNEHERGQIITKLAGQVVPMSQNKFASNVIERCFEHGGSAEREL
LVKEILKQTEGNNYLLVIMKDQYANYVVQKMLTTCNEQHKEILLSRVKIHLPLLKKYTYA
KHIVSLVERLCGDGAVQSESKKTVTKGC
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggctacagagagtgctcggccgttgagtggaggaactggagcagggaagtggccacca
agcaaggacacgggttcctatgattctattccagctagcctttcagaagatgagttagcg
gagttggccttcatgccaaatagtggcggcatttttgggaagtggaggggttctgtcctg
gaacgcagtggaagcgctcctcctaccatggaaggttctttagttgcacttggtcacctc
acaggtcaaccgagtggcaaccttggggccatactgccaaacttgggcactgaagctaac
aattcagagtctaaggagaatatatattatgattcggcatgcgtcaaatactatatgtcc
aaggtgaatttgaacccaaggtttcctccaccactcgtttcaaggaaccagtttggcaag
tctgaagaacgaaagccgttctcccttgatgacagcagcagcaggtccttacttcttggt
catcctactctgccaacacacaaggaagaacctgaggacgaaaagtcaccaagtttggat
tcaagttcagcagacgatgctcaatgtgattctgcccaaagcacatctaacttagggggc
cacagtccaaatcttgtagattcaattaaggaaaactttcatcggagcaatggtttgtat
gataattcttccgatcttttaaatgcaaactctggtgatggagggtcgatttattctggc
attagttcattgaagaattcctcactttatgttgtccagtcatcagacttgaatggattt
ccaccagatgctcatcagcgttcccctagacctattaggactccagtcagtacaaaactt
actagcgacagtctgccagcttcatctcctcccacttcatcctgttctgactacagtact
attactgaagcttgtcagcaaagaaatccaagcatggccgttaaacctggtgaaccagtt
ggtaccatgcttgatagttcagacttcagtctgaagaatttgaatattagtccggatatc
ctaagtagttcatatgtcatgcaacagtggcagaaaaatgccccagtgtggaatggccta
tcaaatgtagtccatggcgatcatgtgccaatgattcctccaggaattaatcttcctcaa
gttccatttgtggacaattccggttttggtcatatgaagttccctggtgatgttcaactg
atgtcccagatcgggatggcaacacctttttgtacaccaaattcttttgggataccatgt
tatcctaatttgcagtcgcctagtgtttgggttcctccattcggaatcggcggctatggt
ttgcctggtccatttgtcccacctgttataactaacttcactcctcaacttcctggtttt
ccttcagcagtaaatcttgctgcagcaactgacttatttcacccatataagatgtatgag
catcttggggtacctatgccatcccctgttcctgatcagagccttacgcattattttcaa
cagccccctatccatccgtatggtgttggaaatccatatgatacaatggtttcaagtaat
aattttgtagggaatcctgctggcgtttttggttcaccaatcattgacccatcagagcag
aagtttcagataccggttactactgtagctgctaatgcctctactcccatcaaaggtgga
aagcccattgggaattatgagactgcctcaccttactttggcgtaccgatgccttatcca
gcaggtccaacattacatgggcaacctgcttctggaacatctcctcgtgacaaaaggaac
gatgtcaagggattccaaccccctcgaaaaaatatgcctgttagttccgagatacaaggt
cagaaagggagggagaagtttgatgatcccaaggcacacttttctgttgaagaactaata
tccagcagaactcatagggttgagctggctgacatcaaaggacagatagtgaaatacagc
tcggaccaaaatggtagccggttcattcagcagaaactggagaattgcaccattgaagaa
aaggatttactttttgccgaggtccttcctcatgctttggaattgatgactgatgtattc
ggaaattatgttattcagaagttcttcgaaaaggggagcccacagcaaaagagagaaata
gctaataagcttgccggtcatgtgttttctttgagccttcagatgtatggatgcagagta
attcagaaggcccttgaagtaattgatcttgaacagaaaattgttcttgttggtgaactc
gatggacatgtgctgcgatgtgttcatgaccaaaatgggaatcatgttatacaaaaatgc
attgaatgtattccattggaacatattggttttctggtgtcatcttttcagtgccaggtt
gccaaactgtcaatgcatacatatggatgtcgtgttattcagagaatcctcgagcgttgc
agcaataattctgaatgcctttgcataattgatgaaatcttgcagtctgcttgcatcctc
gcacaagatcagtatgggaactatgttgtgcagcatgttttggagaaagggaatgaacat
gaaaggggccaaatcatcactaaattggctgggcaggtagtgcccatgagccaaaacaaa
tttgcgtctaatgtcatagagaggtgttttgaacatgggggcagtgcagagcgggaactt
ttggtcaaggagattctgaagcaaactgagggcaataactatttgctggtgataatgaag
gaccagtatgctaattatgtggtacagaagatgcttacaacatgcaatgaacaacataag
gagatccttctcagtcgtgtgaaaatccatttgccattattgaagaaatacacctatgcc
aagcacatcgtcagcctagtcgagcgcctctgcggtgacggagctgtgcagtccgaatcc
aaaaaaactgtaaccaagggctgctga
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