Oryza sativa japonica (Japanese rice): 4347507
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Entry
4347507 CDS
T01015
Symbol
OsJ_29931, PBF1
Name
(RefSeq) proteasome subunit beta type-1
KO
K02732
20S proteasome subunit beta 6 [EC:
3.4.25.1
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
4347507 (OsJ_29931)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
osa01002
]
4347507 (OsJ_29931)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
osa03051
]
4347507 (OsJ_29931)
Enzymes [BR:
osa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
4347507 (OsJ_29931)
Peptidases and inhibitors [BR:
osa01002
]
Threonine peptidases
Family T1: proteasome family
4347507 (OsJ_29931)
Proteasome [BR:
osa03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
beta type subunits
4347507 (OsJ_29931)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-GeneID:
4347507
NCBI-ProteinID:
NP_001390795
UniProt:
A0A516UX48
LinkDB
All DBs
Position
9:join(23973258..23973298,23973396..23973503,23974980..23975061,23975503..23975632,23975748..23975890,23976064..23976150,23976250..23976324)
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AA seq
221 aa
AA seq
DB search
MSRRGDWVYENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSG
FQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSE
GKGCVFTYDAVGSYERTGYSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAV
DLVKDVFASATERDIYTGDKLEIVVINKAGTKREYIDLRKD
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggcgcggcgactgggtctacgagaacaacggcgggacgtgcgtggccatcgcc
ggcgcggactactgcgtggtggccgccgatacccgcctttccgtcggatacaacatcctc
acgcgcgaccactccaagatctgcgagctagcggacaaatgcgcactagcatcttccggc
ttccaaggtgatatcaaagctctgcacaagaacttggctgccagagaattgctgtaccag
caccagcacaataaaaggatgagctgccctgccatggcacaactgctctccaacactctg
tactacaagcgattcttcccatattatgctttcaatgtacttggtgggcttgatagtgaa
gggaaaggatgtgttttcacctatgatgcagttgggtcctatgagaggactggctacagt
gcacagggaacaggatctgctttgatcatgccagtgctggacaaccaactaaaatcacct
agtccactattactccctgcaagagatgccgtcacacctttgtcggagacagaggcggtc
gatttagtgaaggatgtgtttgcatcggcaactgagagggacatctacactggtgataag
ctggagatagttgtcatcaacaaagctgggacgaagcgagagtacatcgacctgaggaag
gactag
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integrated database retrieval system
