Oryza sativa japonica (Japanese rice): 4347577
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Entry
4347577 CDS
T01015
Name
(RefSeq) GTPase-activating protein gyp1
KO
K20360
TBC1 domain family member 2
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4347577
Membrane trafficking [BR:
osa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
4347577
Retrieval pathways
4347577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
4347577
NCBI-ProteinID:
XP_015612686
UniProt:
Q69IL7
A0A0P0XPR3
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All DBs
Position
9:complement(join(24498041..24498202,24498368..24498469,24498542..24498627,24498951..24499222,24499726..24499817,24499911..24500048,24500125..24500195,24500502..24500685,24500763..24500895,24501277..24501371))
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AA seq
444 aa
AA seq
DB search
MSGGGGGGGGGGGGSPNNTEWRFNQTLRNVQGMLKGRSFPGKVLLTRRSEPLSPPEYSPR
YENDRDEYEQNEGSQEGKGQASGNTADSMSAKKSNPPSTSSTNSLPDAQGLVSGARATDS
ARIAKFTNELSRPAVILDKLRELSWSGVPPYMRPNIWRLLLGYAPPNADRREGVLTRKRL
EYVECVSQYYDIPDTERSDEEINMLRQIAVDCPRTVPDVTFFQHPQIQKSLERILYTWAI
RHPASGYVQGINDLLTPFLVVFLSEHLEGNMDTWSMEKLSPQDVSNIEADCYWCLSKFLD
GMQDHYTFAQPGIQRLVFRLKELVHRIDEPVSKHMEEQGLDFLQFAFRWFNCLMIREIPF
HLVTRLWDTYLAEGDYLPDFLVYISASFLLTWSDKLKKLDFQEMVMFLQHLPTRNWAHHE
LEMVLSRAYMWHTMFKSSPSHLAS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggcggcggaggaggcggaggcggaggaggaggaagccccaacaacacggaa
tggcgcttcaaccagacgctccgcaacgtgcaaggaatgctcaaagggcggagctttcct
gggaaggtcttgctgacccgaagatcagaacctctttcacctcctgaatactccccgcgc
tatgagaatgatcgtgatgaatacgaacagaatgaaggctcacaagaaggaaaagggcaa
gcatctggaaacacagctgatagtatgagtgcaaagaaatcaaatcctccatcaacaagt
agcaccaattcattaccagatgcccaaggattagtttctggggctagagctacagattct
gcacgaattgctaaattcacgaacgaactatctaggccagctgttatattagacaagttg
cgggaactgtcttggagtggtgttccaccttatatgcgacctaatatatggagacttctt
ctgggatatgcaccacctaatgcagatagaagagaaggtgttctgacgaggaaaagactt
gagtacgttgaatgtgtttctcaatactatgatattcctgatactgaacgctctgatgaa
gagattaatatgcttcgacagattgctgttgattgcccaagaactgtgccagatgttacc
tttttccagcaccctcaaattcagaaatctctggagcgcattttgtatacatgggccatc
cgtcatccagcaagtggttatgttcaaggaataaacgaccttcttacaccattcttggtc
gtattcttatcagagcatctagagggcaacatggacacctggtccatggaaaagctttct
ccacaggatgtttctaatattgaagcggactgttattggtgtctttcaaagtttctcgat
ggtatgcaagaccattacacctttgctcaaccaggaattcagcgccttgttttcaggttg
aaagaacttgttcatcgtatagatgaacctgtgtcaaagcacatggaggaacaaggattg
gactttcttcagtttgcgtttcgttggttcaattgtcttatgattcgtgagattcctttt
catcttgtaacacgcttgtgggatacctaccttgctgaaggcgattatctaccggatttt
cttgtatatatatcagctagctttttgttaacgtggtcagacaagctgaagaaacttgat
tttcaagagatggtcatgttccttcagcaccttccgacgaggaactgggctcaccatgag
cttgagatggtgctctccagggcttacatgtggcacacaatgttcaaaagctcgccaagt
cacctcgccagctag
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