Oryza sativa japonica (Japanese rice) (RefSeq): 4347617
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Entry
4347617 CDS
T01015
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
osa03400
]
4347617
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
4347617
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
XPG_I_2
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
4347617
NCBI-ProteinID:
XP_015610616
UniProt:
Q64MA3
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All DBs
Position
9:20389908..20394067
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AA seq
629 aa
AA seq
DB search
MGVGGSFWDLLKPYARHEGAGYLRGRRVAVDLSFWVVSHSAAIRARSPHARLPHLRTLFF
RTLSLFSKMGAFPVFVVDGQPSPLKSQVRAARFFRGSGMDLAALPSTEAEASADALVQPR
NAKFTRYVEDCVELLEYLGMPVLRAKGEGEALCAQLNNQGHVDACITSDSDAFLFGAKTV
IKVLRSNCKEPFECYNMADIESGLGLKRKQMVAMALLVGSDHDLHGVPGFGPETALRFVQ
LFDEDNVLAKLYEIGKGVYPFIGVSAPNIDDLPSPSTKSLPRARSPHCSHCGHPGNKKNH
IKDGCNFCLVDSLENCVEKPAGFICECPSCDKARDLKVQRRNENWQIKVCKRIAAETNFP
NEEIINLYLNDDNLDNENGVPLLTWNKPDMEILVDFLSFKQNWEPAYIRQRMLPMLSTIY
LREMASSQSKSFLLYDQYKFHSIQRIKIRYGHPYYLVKWKRVTRSMISNDPPSKQTELEG
KNDKVEVLDGDDEVVDEEEEEPTMISETTELLDEPDVPQVLDDDKDCFLLTDEDIELVNA
AFPDEAQRFQEEQRLKEAKSIARKSKLNVAGFETPKGPRPSGVQLSIKEFYRSKKGLSGD
SGKDGSRKSSDVDLSKNLPKSVRRRLLFD
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggggggaagcttctgggacctgctcaagccgtacgcgcggcacgagggcgcg
gggtacctccgcggccgccgcgtcgccgtcgacctctccttctgggtcgtctcccacagc
gccgccatccgggcgcgctcgccgcacgcgcgcctcccccatctccgcaccctcttcttc
cgcaccctctccctcttctccaagatgggtgcttttcctgtgttcgtggtggacggccag
ccgtcgccgctcaagtcgcaggtgagggccgcgcgattcttcagaggatctggaatggac
ctcgctgcgctgccgagcacggaggcggaggccagtgcggatgcgctggttcaaccgagg
aatgccaagttcacgcgatacgtggaggattgcgtggaactgcttgaatatcttggaatg
cctgtgctgcgggcaaaaggtgaaggtgaagctctttgtgctcagttgaataatcaaggc
catgtagatgcttgcatcacttcagacagtgacgctttcctctttggggctaagactgtc
ataaaggttctccgatcgaattgtaaggaaccttttgagtgctacaacatggcagacatt
gagtctggtcttggactaaagaggaaacaaatggtagcaatggcacttcttgttggcagt
gaccatgacttgcatggtgtgcctggttttggtcctgagactgcacttcggtttgtgcag
ttatttgatgaagataatgttctagctaaattatatgaaattggtaaaggggtctatcca
tttataggagttagtgcgcccaatattgatgatctcccatcaccctccacaaagagtcta
ccgcgtgcgcgatcaccgcactgctcacattgtggtcaccctggcaacaagaaaaatcat
atcaaggatgggtgcaacttttgcttggttgattcattagagaattgtgtggagaagcca
gctggattcatatgtgaatgtcctagttgtgacaaggcacgtgatctgaaggtgcagaga
agaaatgaaaactggcaaatcaaggtctgtaaaaggatagctgctgagactaactttcca
aatgaggagatcattaacttgtacttgaatgatgacaatttggataatgaaaatggtgtt
ccattgcttacatggaataaacctgatatggagattttggttgacttcttatctttcaag
cagaactgggagccagcgtatattcgtcagcggatgcttcctatgctatcaaccatatat
ttacgcgaaatggcttcatctcaatctaaatcatttcttctttatgatcaatataaattt
cattcaatccaacggattaagataagatatggtcacccatattacttggtcaagtggaag
agagtcactcgtagtatgatatccaatgatccacctagcaagcagacagaattggagggg
aagaatgataaggtggaggtattggatggagatgatgaggtagtagatgaagaggaggag
gagcctacaatgatttccgaaactactgaactgctagatgagccagatgttccacaagta
ctggatgatgataaagattgctttttattaactgatgaagacattgagctagtgaatgct
gcatttcctgatgaagcacaaagatttcaggaagaacagaggctgaaagaagcaaagtca
atagcacggaaatccaagctcaacgtggcaggtttcgaaacaccaaaaggtccaaggcct
agtggagttcagcttagcatcaaggagttctaccgctccaagaaagggctgagtggcgac
tcagggaaggacggctcaagaaaatcctccgatgtggacctcagcaagaacttgcccaag
tctgtccgacgacgcctcctcttcgactga
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