Oryza sativa japonica (Japanese rice): 4347669
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Entry
4347669 CDS
T01015
Name
(RefSeq) protein SHORT INTERNODES 1-like
KO
K27807
short internodes/stylish family transcription factor
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4347669
Transcription factors [BR:
osa03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
4347669
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Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
4347669
NCBI-ProteinID:
XP_015611315
UniProt:
Q652K4
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All DBs
Position
9:complement(join(25280835..25281235,25281312..25281858))
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AA seq
315 aa
AA seq
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MAGFPLGGGSHSRDNPAPPVPPVHPADAASFLYATRGGSFQLWQQQEQQPFYASNIIRFA
DDAPPAPSLAGASSSSSSRGMRSSGGGGGGGGGGISCQDCGNQAKKDCTHMRCRTCCKSR
GFACATHVKSTWVPAAKRRERQQQLAALAASAAATAGGAGPSRDPTKRPRARPSATTPTT
SSGDQQMVTVAERFPREVSSEAVFRCVRLGPVDQAEAEVAYQTAVSIGGHVFKGILHDVG
PEALAVAGGGGASEYHFRLTGDGSSPSTAAAGEAGSGGGGNIIVSSAVVMDPYPTPGPYG
AFPAGTPFFHGHPRP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcggggttccctctaggcggaggaagccacagccgagacaacccggcgccgcccgtc
ccgccggtgcaccccgccgacgccgcctcgttcctgtacgccacgaggggcgggagcttc
cagctatggcagcagcaggagcagcagccgttctacgcctccaacatcatccgcttcgcc
gatgacgcgcccccggcgccgtcgttggcgggggcgtcgtcctcgtcctcgtcgcgcggg
atgcggtcgagcggcggcgggggcggtggcggcggcggcggcatcagctgccaggactgc
ggcaaccaggccaagaaggactgcacccacatgcgctgccgcacctgctgcaagagccgg
ggcttcgcctgcgccacccacgtcaagtccacctgggtccccgccgccaagcgccgcgag
cgccagcagcagctcgccgcgctcgccgcctccgccgccgccaccgccggcggcgccggc
ccatctcgcgaccccaccaaacgcccccgcgcgcgtccctccgccaccaccccgacgacc
tcctcaggagatcagcagatggtgacggtggcggagaggttcccgcgggaggtgagctcg
gaggcggtgttccggtgcgtgcggctggggccggtcgaccaggccgaggcggaggtcgcg
taccagacggccgtcagcatcggcggccacgtgttcaagggcatcctgcacgacgtcggc
cccgaagccctggcggtcgccggcggcggcggcgccagcgagtaccacttccgcctcacc
ggcgacgggtcctcgccgagcaccgccgcggccggcgaggcaggctccggcggcggcggc
aacatcatcgtgtcatcggctgtggtgatggacccgtacccgacgcccgggccctacggc
gcgttccccgccggcacgccattcttccacggccacccgcggccgtga
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