Oryza sativa japonica (Japanese rice): 4347674
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Entry
4347674 CDS
T01015
Symbol
OsJ_30112, OsPRR95, PRR95
Name
(RefSeq) two-component response regulator-like PRR95
KO
K12130
pseudo-response regulator 5
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
4347674 (OsJ_30112)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
CCT
Jas_motif
RELT
Motif
Other DBs
NCBI-GeneID:
4347674
NCBI-ProteinID:
NP_001390860
LinkDB
All DBs
Position
9:complement(join(25327597..25327689,25327790..25328456,25328812..25329133,25329263..25329401,25330075..25330227,25330353..25330483,25330576..25330737,25331461..25331665))
Genome browser
AA seq
623 aa
AA seq
DB search
MGGGVEERKVVDLEDGDGEEGEDAAAVAAGSSRETRMLPRMPVRVLLAEGDDSTRHIICA
LLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMSGFLLLSTIMEHDACKNIP
VIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRKQLSSGVLDVQHTQQED
NLTERHEQKTGVTKAEHVTENVVHKNMECSEQESDAQSSCTRSELEADSRQTNNLLEYKQ
PMGRHFSKPDHKNTEKNGGTKIHASNDGNLIPRREEDASLRRMTCSNDINCEKASRDMEL
VHIIDNQQKNNTHMEMDVARANSRGNDDKCFSIPAHQLELSLRRSDYSRLESQEKNERRT
LNHSTSSPFSLYNCRTASSTINAGDAQACSTSATHIDLENKNGDSKTPSQDKRETNQPPI
RVVPFPVPVGGLTFDGQPFWNGAPVASLFYPQSAPPIWNSKTSTWQDATTQAISLQQNGP
KDTDTKQVENVEEQTARSHLSANRKHLRIEIPTDEPRHVSPTTGESGSSTVLDSARKTLS
GSVCDSSSNHMIAPTESSNVVPENPDGLRHLSQREAALNKFRLKRKDRCFEKKVRYQSRK
LLAEQRPRVKGQFVRQDHGVQGS
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggggggtggagtggaggagaggaaggtggtggacttggaggacggggacggggaggaa
ggggaggatgcggcggcggtggcggcggggtcgagcagggagacgcggatgctgccgagg
atgccggtgcgggtgctgctcgctgagggcgacgactccacgcgccacatcatctgcgcg
ctgctccgcaagtgcgggtatcgagttgccgcagcctctgatggtgtgaaagcgtgggac
atactaaaggaaaaatctttcaatatagaccttgttttaactgaagttgaacttcccttg
atgtctgggttcctgctgctctccacgatcatggaacatgacgcatgcaagaatatcccc
gtcataatgatgtcttcaaatgattccgttagcatggttttcaaatgcatgctaaagggt
gctgcagatttccttgttaagccaatacggaagaatgaattaaggaacttatggcagcat
gtttggagaaaacaactgtccagcggtgttcttgatgtgcagcatactcaacaagaagat
aatcttacagaaaggcatgagcagaagaccggagtgacgaaagctgaacatgtgactgaa
aatgttgtccacaagaacatggaatgcagtgaacaagaaagtgatgctcaaagttcatgt
acaaggtcagaactggaggctgacagtaggcaaaccaacaatttactggaatataagcag
ccaatgggaaggcatttctccaagcctgaccacaagaacaccgagaaaaatggagggact
aaaattcatgcatctaatgatggcaacttgattccacggagggaagaggatgcatcactg
aggaggatgacatgttcaaatgatattaattgtgagaaagcttccagggatatggagctg
gttcatattattgacaatcagcagaagaataacacacatatggagatggatgttgcgaga
gcaaattcccgtggaaatgatgacaagtgcttttccattccagcacaccagttagaactt
tctctcagaagatctgactacagtagattagagagccaggagaaaaatgaacgaagaaca
ctgaaccactcaacttcatctccattttccttgtacaactgcaggacagcatcatctacc
attaatgctggtgatgctcaggcatgcagcacctcggcaacacatatagatcttgaaaac
aaaaatggagattccaaaactccctctcaagacaagagggaaacaaaccaacctcccatt
agagttgtaccatttcctgttcctgttggaggactaacatttgatgggcagccattctgg
aacggtgcacctgtggcatcccttttctatccacaatcagctcctcccatttggaatagc
aaaacatctacctggcaagacgcaaccacacaagcaatttctctgcagcagaatggtcca
aaagatacggatactaagcaggttgaaaatgtagaggaacaaactgctcggagtcatcta
agtgctaatcggaaacatctccgcattgaaattcctacagatgagccgcggcatgtttct
ccaaccaccggtgaaagtgggagcagcactgtgctggacagcgccagaaaaacgctcagt
ggcagtgtctgtgacagctcttccaaccacatgattgcccctactgaatcatcaaatgtt
gttcctgaaaatcctgatggtttacgccacctgagccaacgagaggctgcactgaacaag
ttccggcttaagaggaaagacaggtgctttgagaagaaggtgcgataccagagcaggaag
ctactagccgagcagcgaccgcgggttaagggtcagtttgttcggcaagatcatggtgtc
caagggagctag
Oryza sativa japonica (Japanese rice): 4349831
Help
Entry
4349831 CDS
T01015
Name
(RefSeq) two-component response regulator-like PRR95
KO
K12130
pseudo-response regulator 5
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
4349831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
CCT
DUF5000
SET
Jas_motif
Motif
Other DBs
NCBI-GeneID:
4349831
NCBI-ProteinID:
XP_015617753
UniProt:
Q2RAB7
LinkDB
All DBs
Position
11:join(2835615..2835822,2835971..2836132,2837255..2837385,2837670..2837783,2838101..2838257,2838375..2838798,2839036..2839828,2839980..2840090)
Genome browser
AA seq
699 aa
AA seq
DB search
MSPDADAAAAAAAGGEGAAAAGVGTAGEGRGVIRWDQILPRRSLRVLLVEHDDSTRQVVT
ALLRKCGYRVAAVADGMKAWGVMRERAYAFDLVLTEVTMPTLSGIELLSRIVASDECKNI
PVIMMSSQDSIGTVLRCMQKGAVDFLVKPVRKNELRNLWQHVWRRHAMNSQTNASENNAA
SNHLSANGGNGSKTGEHSDEESDAQSSGSKREVEIQSAEKLPEVVADGGAGSSREHKIQN
GFIDGMNTKSHALKGNDDAPSGNACGDSELQVLSTEKNVRSKFLNGITSAKVAGQIMDNA
LRFADSSSLRSSDPGKDLLVVAQTTADRKCKSSALENNAVMENNLSENSKGTATGHAESC
PSHFVEINLEKQHHLNGYTNHKLNEKDIFNHSNSSAFSRYGNKRIESSAQRPFPPSFRVV
HQQPVYDKNPQSSRVLLSCEHNTRESTVQAQVPLDRSTEGAAILCSSSVREDAGTSSSSP
RKDSLTHPSYGFIPVPIPVGAAIPYHYGAIMQPMYYPQGAFMHCDSAAINKTAIQHVSCQ
SNYHENLGKPPQIDEHKQPEENHQLHHSRQILRESGEPVDLAKAHMERINQSASCSQDIR
KGSGCTGSGETDANTNTVIALESGNESGVQNCSNNVLDGDRSRREAALLKFRMKRKDRCF
EKKVRYHSRKKLAEQRPRVKGQFVSQKLKSAITTEAETD
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgacgccgacgcggcggcggcggcggcggccggcggcgagggcgcggcggcg
gcgggggtggggacggcgggtgaagggcggggggtgatccggtgggaccagatcctgccg
cggcggtccctccgcgtgctgctcgtcgagcacgacgactccacccgccaggtcgtcacc
gcgctcctccgcaagtgcggctaccgcgtggcggcggtggcggacgggatgaaggcgtgg
ggggtgatgcgggagcgggcgtacgccttcgacctcgtgctcacggaggtcactatgccc
acgctctccggcatcgagctgctctccaggatcgtcgcctccgacgagtgcaagaacatc
cccgtcataatgatgtcgtcccaagattctattggcacagtgctcaggtgcatgcagaag
ggtgcggtggatttccttgtgaaaccagtgagaaagaatgaattgcgtaacttatggcaa
catgtatggaggcgacatgcaatgaatagccaaacaaatgcatcggaaaacaatgcggct
agcaatcatttaagtgccaatggtggtaatgggtcaaagacaggagaacacagcgatgag
gaaagtgatgctcagagttctggtagcaaaagggaggttgaaattcaaagtgctgaaaag
ttaccagaggttgttgcagatggtggggcaggctcatccagagaacataaaatacagaat
ggtttcattgatggaatgaacacaaaatcacatgcattaaagggtaatgatgatgctcca
agtggaaacgcgtgtggtgatagtgaactacaagtgctttcaactgagaagaatgtgcgt
tccaaattccttaatggtattacttctgcgaaggttgctggacagataatggataatgcc
ttgaggtttgctgattcaagttcacttcgttcaagtgatcctggaaaagatcttttggtt
gttgcccagaccacagctgacagaaaatgcaaatcttcagcactggaaaataatgctgtc
atggaaaataaccttagtgaaaattcaaaggggactgcaacaggccatgctgaatcttgt
ccgtctcactttgtggagataaatttagaaaagcaacatcatctcaatggttatacaaac
cacaagttgaatgagaaagatatctttaatcactcaaattcctctgccttttcgaggtat
ggtaataagaggatagaatcatcagctcaacggccatttcccccttccttccgcgtggtt
caccaacaacctgtttacgacaagaatccccaatccagccgggtcttgctttcctgtgaa
cataatacacgcgagagtacagtgcaagctcaggtccctttggacagaagcacagagggt
gctgcaatcctgtgttccagtagtgtaagagaagatgctggtacaagcagttcctctcct
agaaaggacagtttaactcatccttcttatgggtttatacctgttccaattcctgttggt
gctgctataccctaccactacggtgcaattatgcagccaatgtattatccacagggtgct
tttatgcattgtgattcagctgccatcaacaagacagcaattcagcatgtctcttgtcaa
tctaactaccatgaaaatcttggtaaaccgccacagattgatgagcacaagcagccagaa
gaaaaccatcagttgcatcattcaagacaaattctccgagaatcaggagaaccagttgac
ttggcgaaggctcatatggagcgtattaaccagagtgctagctgtagccaggatattcgc
aaaggaagtggatgcactgggagcggtgaaactgatgcaaatacaaatacggtaattgca
ctagaaagtggcaatgagagcggtgtccagaactgcagtaataatgtattggatggtgac
cggtctcgccgtgaagctgccttgttgaaattccggatgaaaagaaaagatagatgtttc
gagaaaaaggtcaggtatcatagcaggaagaagcttgcagaacaaagacccagggttaag
ggccagtttgtgagccaaaaactgaagtcagctataacaacagaggcagaaactgactag
DBGET
integrated database retrieval system
