Oryza sativa japonica (Japanese rice) (RefSeq): 4347697
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Entry
4347697 CDS
T01015
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
4.2.99.18
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
4347697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
osa03400
]
4347697
Enzymes [BR:
osa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
4347697
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
4347697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
zf-GRF
Motif
Other DBs
NCBI-GeneID:
4347697
NCBI-ProteinID:
XP_015612024
UniProt:
Q69JZ1
Q0J018
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Position
9:complement(21063900..21068759)
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AA seq
619 aa
AA seq
DB search
MVKIVTYNVNGLRPRVAQHGSLRRLLDALDADIICFQETKLSRQDLSGDVIMAEGYEAFI
SCNRSSKGRGAYSGVATFCRVTSAFSSQEVALPVAAEEGFTGLQETAKNSETIGDFVLVT
PVEEEGLGEVTKEELLKVDNEGRCVITDHGHFVLFNIYGPAVEEDDIERVRFKLLFYKIL
QRRWEHLLALGKRVFVVGDLNIAPSSIDRCDAQPGFEKQTFRKWLRSMLREHGGPFFDAF
RSKHPERVGAYTCFNQKVGAEVYNYGSRIDHILISGACFHHCGSVDDHSIFPCHVEECEI
MDHFRRGNSENMSMWKGGRSSKLEGSDHIPVYIVLNEIPELPVHNTPSSAARYLPEIRGR
QQSIVSFLRKGMIYEHKDAMSMDRADESCCGGGLERKAIYKEEPPTDIAKFSKGNDLHSV
IKRKIRDQLLNEGSSGNSHNSTAALLATQSRKASFSCSKAVSNKKNKHNLSSQPTIKSFF
QQPKSKPGDSSTNSIVTPPDTLHGMDELHDPKNDCLPESIQCTTPATEDQGNSDVPCSLS
TDKCNEATLEWQRIQQRMKMTLPLCKGHHEPCIPRSVKKGSNIGRLFYVCARAQGPASNQ
EANCGHFQWATVKSKEKRR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagatagtgacgtacaacgtgaacgggctgcggccgcgggtggcgcagcatggc
tcgctccgccgcctcctcgacgccctcgacgccgacatcatctgcttccaggagacaaaa
ttgtcgaggcaggacttgtcgggggatgtcatcatggctgagggatacgaggcttttatt
tcatgcaatcgttcatcgaaagggcgtggagcttactctggtgttgccacgttttgccgg
gtaacatcagccttttccagtcaagaggttgctttaccagtagcagctgaggaaggcttt
actggattgcaagagactgcaaagaacagtgaaactattggggattttgttcttgtaact
cctgtggaagaggaaggtcttggtgaagtaacaaaagaagagctgctcaaggtggacaat
gaaggacgttgtgtaattacagatcatggacattttgttctttttaatatatatggccca
gctgttgaagaagatgatatagaacgagttcgctttaagctactattttacaagatacta
cagagaagatgggaacatttgttggctcttgggaaaagagttttcgttgttggtgatttg
aatattgcaccttcttcaatagataggtgtgatgcccaacctggattcgagaagcaaacg
tttcggaaatggttgagatccatgctgagagaacatggaggtccattttttgatgctttc
cgatcaaaacaccctgaaagagtgggagcttatacctgttttaatcaaaaagttggagct
gaagtatacaattatggttctagaattgatcacattctcatttctggtgcctgcttccat
cactgcggttctgtggatgaccacagcatctttccctgccatgtggaagaatgtgaaatt
atggatcatttcagaagagggaatagcgaaaatatgtcaatgtggaaaggagggagaagt
agtaagctagaaggatcagatcatattccagtttatattgtgctgaatgagatacctgaa
cttccagttcataacactccttcatcagctgctagatatcttcctgaaatccgtggacgg
caacagagcatagtatcattcctaaggaaaggcatgatttatgaacataaagatgccatg
tccatggatagagcagatgaaagctgctgtggtggtggcttggaaaggaaagctatatat
aaggaagaaccaccaactgatatagccaaattttccaaaggtaacgaccttcatagtgtc
atcaagcggaaaattcgtgatcaattgttaaatgaaggttcaagtggcaactcccataat
agcactgcagcattactggcaacacaaagtagaaaagcttccttttcttgcagcaaggct
gtgtccaacaagaaaaacaaacataacttgtcttcccaacctacgatcaagtcatttttt
caacaaccaaagtcaaagccaggagatagcagtaccaatagcatagttactccaccagat
actttgcatggtatggatgaattacatgatccaaagaatgactgtctgccagaaagcatc
cagtgtacaactccagcaaccgaagatcagggtaactcagatgtaccctgctcgctttca
acagataaatgcaatgaagcaacactggagtggcaaagaatacagcagagaatgaagatg
accctaccactttgcaaaggacaccatgaaccttgcattccaaggtctgtgaagaaaggc
tctaatattggtcgcctattctatgtctgtgcccgtgctcagggacctgcatcaaaccaa
gaagcaaattgtggtcactttcagtgggccactgttaagtctaaagagaaacgccggtga
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