KEGG   Oryza sativa japonica (Japanese rice): 4347721
Entry
4347721           CDS       T01015                                 
Name
(RefSeq) SKP1-like protein 20
  KO
K03094  S-phase kinase-associated protein 1
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03083  Polycomb repressive complex
osa04120  Ubiquitin mediated proteolysis
osa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4347721
   04120 Ubiquitin mediated proteolysis
    4347721
  09126 Chromosome
   03083 Polycomb repressive complex
    4347721
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4347721
   04121 Ubiquitin system [BR:osa04121]
    4347721
   03036 Chromosome and associated proteins [BR:osa03036]
    4347721
Membrane trafficking [BR:osa04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    4347721
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     4347721
   Cul7 complex
     4347721
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     4347721
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     4347721
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 4347721
NCBI-ProteinID: XP_015651187
UniProt: Q651E8
Structure
LinkDB
Position
9:complement(join(25685537..25685710,25687478..25687831))
AA seq 175 aa
MAAEAETKAMITLRSCEGQVFEVAEAVAMESQTIRHMIEDKCADTGIPLPNVSAKILSKV
IEYCSKHVEARGGAAAAADGDAPAPAAVEANKAVEDELKTFDAEFVKVDQSTLFDLILAA
NYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
NT seq 528 nt   +upstreamnt  +downstreamnt
atggcggccgaggcggagacgaaggcgatgatcaccctccgcagctgcgagggccaggtg
ttcgaggtcgcggaggccgtggccatggagtcccagaccatccgccacatgatcgaggac
aagtgcgccgacaccggcatcccgctccccaacgtctccgccaagatcctctccaaggta
atcgagtactgcagcaagcacgtcgaggcgcgcggcggggcggccgccgccgccgacggc
gacgcccccgcccccgccgccgtggaggccaacaaggccgtcgaggacgagctcaagacg
ttcgacgccgagttcgtcaaggtcgaccagtccaccctcttcgatctcatcctggctgca
aactacctcaacatcaagggactgctggatctgacctgccagaccgtggctgacatgatc
aaggggaagacaccagaggagatccgcaagaccttcaacatcaagaatgacttcaccccc
gaggaagaagaggaggtgaggagggagaaccagtgggccttcgaatga

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