Oryza sativa japonica (Japanese rice): 4347937
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Entry
4347937 CDS
T01015
Symbol
OJ1136E01.11, PDX12
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1.2
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00750
Vitamin B6 metabolism
osa01100
Metabolic pathways
osa01240
Biosynthesis of cofactors
Module
osa_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
4347937 (OJ1136E01.11)
Enzymes [BR:
osa01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
4347937 (OJ1136E01.11)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
Motif
Other DBs
NCBI-GeneID:
4347937
NCBI-ProteinID:
NP_001409890
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Position
10:complement(86106..87047)
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AA seq
313 aa
AA seq
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MASDGTDVVALYGGANGLSHKSGSFSVKVGLAQMLRGGVIMDVVTPEQARIAEEAGACAV
MALERVPADIRAQGGVARMSDPGLIRDIKRSVTIPVMAKARIGHLVEAQILEAIGVDYVD
ESEVLTLADDAHHINKNNFRVPFVCGCRDLGEALRRIREGAAMIRTKGEAGTGNVVEAVR
HVRSVMGDIRALRSMDDDEVFSYAKRIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAA
LMMQLGCDGVFVGSGIFKSGDPALRARAIVQAVTHYSDPKILAEVSSGLGEAMVGINLSD
PKIHVERFAARSD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgacggcaccgatgtcgtggcgctctacggcggcgccaatggcctctcgcac
aagtccggtagcttctccgtcaaggtgggcctcgcccagatgctgcggggcggcgtcatc
atggacgtggtcacccccgaacaggcgcgcatcgccgaggaggccggcgcctgcgctgtg
atggcgctggagcgcgtccccgccgacatccgcgcccagggcggcgtcgcccgcatgtcc
gaccctggcctcatccgcgacatcaagcgctccgtcaccatcccggtcatggccaaggcc
cgcatcgggcacttggtggaggcccagatcctggaggccatcggcgtggactacgtggac
gagagcgaggtgctcaccctcgccgacgacgcccaccacatcaacaagaacaacttccgc
gtccccttcgtgtgcggctgtcgcgacctcggcgaggcgctccgccgcatccgggagggc
gccgccatgatccgcaccaagggcgaggccggcacgggcaacgtcgtggaggccgtccgc
cacgtgcgctccgtgatgggcgacatccgcgcgctccgcagcatggacgacgacgaggtc
ttctcctacgccaagcgcatcgcggcgccctacgacctggtcatgcagaccaagcagctg
gggcgtctccccgtcgtgcagttcgcggcaggtggggtggccacccccgccgacgctgcc
ctcatgatgcagctcggctgcgacggcgtcttcgtcggctccggcatcttcaagagcggc
gaccccgcgctgcgcgcccgtgccatcgtgcaggctgtcacccactacagcgatcccaag
attctggcggaggtcagcagtgggctcggcgaggccatggttggcatcaacctctccgac
cccaagatacatgtcgagcgcttcgccgcccgctccgactag
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