Oryza sativa japonica (Japanese rice): 4348056
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Entry
4348056 CDS
T01015
Name
(RefSeq) small GTPase LIP1
KO
K07933
Rab-like protein 3
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
osa04031
]
4348056
GTP-binding proteins [BR:
osa04031
]
Small (monomeric) G-proteins
Unclassified
4348056
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GFIT
Motif
Pfam:
Roc
Ras
Arf
MMR_HSR1
Gtr1_RagA
AAA_16
RsgA_GTPase
GTP_EFTU
SRPRB
nSTAND1
AAA_29
MCM
ABC_tran
Sigma54_activat
DUF815
AAA_7
AAA_22
NACHT
Hpr_kinase_C
Motif
Other DBs
NCBI-GeneID:
4348056
NCBI-ProteinID:
XP_015612970
UniProt:
Q33B74
B9G7E8
LinkDB
All DBs
Position
10:complement(join(2187123..2187318,2187501..2187625,2187720..2187773,2188022..2188326,2188661..2188811,2188892..2188983,2190761..2190869))
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AA seq
343 aa
AA seq
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MRFWRDSGGGGSGGGRDLNGGGTPCGQVRVLVVGDSGVGKSSLVHLILKGSAIARPPQTI
GCAVDVKHITYGSPGSSSNSINSIKGDAERNFFVELWDVSGHERYKECRSLFYSQINGVI
FVYDLSQRKTKTNLNKWAVEVAESGTFSAPLGSGGPGGLPVPYLVIANKVDIAPRDGKRV
SSGNLVDVARQWVEKQGLLPSSEELPLAESFPGNSGLLTAAKVARYDKEALVKFFRMLIR
RRYFSNELPAPSPWSLTPREDTILPVETTNDDDLFQRKSYAGQSYKYSGVTPLPAQRNLT
PPPTLYPQQPMSSSSENYRYHRFSSSAIPDASSSRTNRADINI
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaggttctggagggacagcggcgggggcggcagcggcggaggccgggacctcaacggc
ggcggcaccccctgcggccaggtgcgcgtgctcgtcgtcggcgactcaggtgtggggaaa
tcatcattggttcatctcattctgaaaggctctgcaattgctcgaccaccccaaacgatt
ggatgcgcagttgatgttaaacatattacttatggaagtcctggaagttcttctaatagc
attaatagcattaagggtgatgctgaaagaaacttttttgttgagctctgggacgtttca
ggacacgagcgctacaaagagtgccgatcacttttttattctcaaattaatggtgtcata
tttgtttatgacctctctcagaggaaaacaaagacaaatttgaacaagtgggcagtggag
gttgctgaatcagggaccttttcagctcctcttgggtctggtggtccaggaggccttccg
gttccttacttagtgattgcgaacaaggtggatattgctccaagagatggtaaaagagtt
agcagtggaaatcttgttgatgttgctcgtcaatgggttgagaagcaaggcctacttcca
tccagtgaagaacttccacttgcagaaagcttccctggcaattctggtttgctcacggct
gctaaagtggcaagatatgacaaagaagctttggttaagttcttccgcatgttgataagg
agaagatatttttcaaacgagcttcctgctcctagcccatggtccctcactcccagagag
gataccattcttcctgtagaaacaacgaatgatgatgacctgtttcaaaggaaaagctac
gctggccagagttacaaatacagtggcgttacgccattgcctgctcagcggaatctaact
ccaccacccactctctacccgcagcaaccaatgtcatcgtcttcagagaactacagatat
cacaggttctcctcatcggcaattcctgacgcaagcagtagtagaacgaaccgagcagat
atcaatatatga
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