KEGG   Oryza sativa japonica (Japanese rice): 4348309
Entry
4348309           CDS       T01015                                 
Name
(RefSeq) glycine-rich RNA-binding protein 10
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4348309
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4348309
   03041 Spliceosome [BR:osa03041]
    4348309
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     4348309
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     4348309
Spliceosome [BR:osa03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    4348309
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 4348309
NCBI-ProteinID: XP_015614820
UniProt: Q109W0 Q0IYG0
LinkDB
Position
10:complement(join(9253343..9254011,9261604..9261710,9261818..9261886,9262019..9262127))
AA seq 317 aa
MAFLRKVGNLVRQSAGSGSPLFQAVRCMSSSKLFIGGISYGTDDQSLKEAFANYGEVIEA
RVIVDRTTGRSRGFGFVTYTSTDEAAAAITGMDGKDLQGRIVRVSYAHDRGSRAGGYGGG
GYSGQGTYGGGGGYGGGGYGGQDAYGGRGVGGYSEGGRGYVGGGYGDGNNYGGYNTSGGY
NSEGGRGGYSVFEGGHGYGSGGTGYTGGSGGYNSAPGNYSSDNFNQGGAAPGAYEGANYG
GGNNYMNNATSDDSTGKLDELLNDLKVDGDGKEDGEGKADGAGLVNEDLKGDDGQDELLQ
NDFKDEDVSDDYANKRR
NT seq 954 nt   +upstreamnt  +downstreamnt
atggccttcttgcggaaggttgggaacctcgtcaggcagtccgcaggctcgggctcgccg
ctgttccaggcggtccgatgcatgtcctcctcgaagctcttcatcggaggaatctcttat
ggtactgatgaccagagtctgaaggaagcgtttgctaactacggtgaagtcattgaagct
agggtgattgtggaccgtaccactggacggtcgaggggatttggttttgtaacctacaca
tccacggatgaggctgcagctgccattactggcatggacgggaaggatctgcagggccgg
attgtgcgggtgagttatgctcatgaccgtggtagccgtgctggtggctatggtggtgga
ggctacagtggacagggtacgtatggtggtggcggtggctatggaggtggaggctatggt
ggacaggatgcatatggtggtcgtggtgttggaggctatagtgagggtggccgtgggtat
gttggtggtggatacggtgacggtaacaattacggtgggtataacacaagtggtggatat
aattctgaaggtgggcgtggtggctatagtgtttttgaaggtggacatggctacggtagt
ggcggtactggttacacaggaggcagcggcggatataattcggcccctggaaattacagc
agtgacaacttcaatcaagggggtgcagcacctggtgcatatgaaggtgcaaactacggt
ggaggcaacaactacatgaacaatgcaaccagtgatgattccaccggtaagctggacgag
ttgttaaatgatcttaaagttgatggtgatggcaaagaggatggtgagggcaaagcggat
ggcgctggcctggttaatgaggatctgaaaggagatgatggtcaggatgaattgcttcag
aatgatttcaaagatgaagatgtgtctgatgactatgccaacaaaagacgttaa

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