Oryza sativa japonica (Japanese rice): 4348449
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Entry
4348449 CDS
T01015
Name
(RefSeq) probable galacturonosyltransferase 3 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00520
Amino sugar and nucleotide sugar metabolism
osa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
4348449
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
osa01003
]
4348449
Enzymes [BR:
osa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
4348449
Glycosyltransferases [BR:
osa01003
]
Polysaccharide
Structural polysaccharide
4348449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
4348449
NCBI-ProteinID:
XP_015614953
LinkDB
All DBs
Position
10:join(11845951..11846171,11846334..11846372,11846468..11846507,11846610..11846756,11846852..11846959,11847186..11847520,11847643..11848615,11848773..11849051)
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AA seq
713 aa
AA seq
DB search
MRQGGARRSSEISFPRRKGAQIKQTKRKSVSPRPHPWHSPPPRRWRIPEVCPHCAAAPDS
SPSLLPSSFSSPSRLAVSGWLFSDHQTGHKGPGSCPGCHNGMDNADKTIAYTNQDGRIRL
FKVTTREFLSSSIWKNPLLPKDTEPVAEIQEIAEEQLLATGSEVSNLSSTETLETRTDPI
KLKREVFRRKRKEHRIQELLQVDKEAELHMRNVATNRSRNFSNKVRASYNIWRLQFHHTN
TDSTLRLMKDQIIMAKVYATIAHSQKQPDMYALLMKCIKLCQEAIGDAHMDYELDSSALE
RAKAMGHALSSARDVLYNSDEVSRRLLVMLQSTELNIDSVKKQNSFLVQHAAKTVPMPLH
CLHMQLTTDYYFRDGMIKEYFHDAALKEEEDKAKREDRSLYHYAIFSDNVLAASVVVRST
VTHAKEPEKHVFHIVTDRLNFAAMTMWFIRHPPLPATVHVENIDNFKWLNSSYCSVLRQL
ESARLKEYYFKAHDPSSLSDGNENLKYRNPKYLSMLNHLRFYMPEIHPKLDKILFLDDDV
VVQKDLTPLWDVDLKGMVNGAVETCKESFHRFDTYLNFSHPKIAENFDPRACGWAFGMNM
FDLKEWKKQNITGIYHYWQDLNEDRKLWKLGTLPPGLITFYNLTYPLNRNWHVLGLGYDP
AVDLAEIENAAVVHYNGNYKPWLDLAVSKYKPYWSKYVDLDNSHIQHCYMSEQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgagacaaggaggagccaggaggtcctctgaaatttccttccctcgcagaaaaggtgca
caaataaaacaaacaaaaaggaagtctgtatccccacgaccccacccatggcattcccct
ccacctcgtcggtggcgtatcccagaagtctgtccccactgcgccgctgccccggattcc
tcgccctccttgttgccgtcctccttttcctctccttccagattggcagtgtccggatgg
ctcttctccgatcaccagactgggcacaagggtcccgggagctgtcctggatgccacaat
ggcatggataatgccgataagactattgcttacacgaatcaggatggtcggatcaggctg
ttcaaagttaccacaagagaattcttgtcgtcctctatctggaagaatcctttgttgccg
aaagataccgagccggtagctgaaatacaagagattgcggaggagcagctactagccact
gggtcagaagtctccaatctttcaagcacagaaactttggaaactagaactgatccaatt
aaattaaagagagaggtgttccgacgtaaaagaaaggagcataggattcaggagttgctt
caggtggacaaggaggctgagctccatatgcgaaatgtagcgacaaacagatcgaggaac
ttcagtaacaaagtaagagccagctacaacatatggaggctgcagtttcaccatactaat
acggattcaaccctgagacttatgaaagatcagataataatggccaaggtgtatgccaca
attgcacattcccagaagcaacctgacatgtacgcgttgctcatgaagtgcataaaacta
tgccaggaagctattggggatgcacacatggattatgaacttgattcgagtgctttagag
cgagcaaaagcaatggggcatgccttgtcttcagctagagatgttctgtacaactccgat
gaagtatctagaagattgcttgttatgctgcagtctacagaactaaatattgatagtgtt
aagaagcagaactcattcctggtgcagcatgctgcaaagacggtccccatgcccttgcac
tgtctgcatatgcagctgacaaccgattattactttcgtgatggtatgatcaaggaatat
ttccatgatgccgctttgaaggaagaagaagataaagcaaagcgtgaggataggtcacta
taccactacgctatattttcagataacgtccttgcagcctcagtagttgtcagatcaact
gtgacacatgccaaggaaccagagaagcacgtgttccacatcgtcactgatagacttaat
tttgcagctatgacgatgtggtttatacgtcatcctcctctacctgctactgtccatgtg
gaaaacattgacaacttcaagtggctcaattcatcatactgttcagtcctacgacaactt
gagtcagctcggctcaaagagtactatttcaaagcacatgatccatcatcactctctgac
ggaaatgaaaatctgaagtacaggaaccccaaatatctgtctatgcttaaccatctaagg
ttctacatgccagaaatacaccccaagcttgacaagatattgtttcttgacgacgatgtt
gttgtacagaaggacttgacaccattatgggacgttgatcttaaagggatggtaaatggt
gcagttgaaacctgcaaagaaagtttccatcgcttcgacacgtacctcaatttctcacac
ccaaagatcgcagagaacttcgatccacgtgcttgtgggtgggcttttgggatgaacatg
tttgacctgaaagagtggaagaagcaaaatatcactggaatataccattattggcaagat
ctgaatgaggatcgcaagctgtggaagctgggcacactgcctccaggactgattactttt
tacaacctgacatacccattgaatcgcaattggcatgtgttggggcttggctatgatcca
gctgttgaccttgccgagattgagaatgcagcagtagttcattacaatgggaactacaag
ccctggctagaccttgctgtctccaagtacaagccctactggtccaagtatgtagatctt
gacaattcacacatccagcactgctacatgagtgagcaatga
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