KEGG   Oryza sativa japonica (Japanese rice): 4348464
Entry
4348464           CDS       T01015                                 
Name
(RefSeq) glutamate--tRNA ligase, cytoplasmic
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00860  Porphyrin metabolism
osa00970  Aminoacyl-tRNA biosynthesis
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
osa01240  Biosynthesis of cofactors
Module
osa_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    4348464
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    4348464
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:osa01007]
    4348464
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:osa03016]
    4348464
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:osa02048]
    4348464
Enzymes [BR:osa01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     4348464
Amino acid related enzymes [BR:osa01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   4348464
Transfer RNA biogenesis [BR:osa03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    4348464
 Prokaryotic type
   Other AARSs
    4348464
Prokaryotic defense system [BR:osa02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    4348464
SSDB
Motif
Pfam: tRNA-synt_1c tRNA-synt_1c_C tRNA-synt_1c_C2 Arc1p_N_like GST_C tRNA-synt_1e GST_C_3 GST_C_6 GST_C_2
Other DBs
NCBI-GeneID: 4348464
NCBI-ProteinID: XP_015614227
UniProt: Q8S5M6 A3C430
LinkDB
Position
10:complement(join(12184246..12184464,12184761..12185225,12185315..12186390,12186482..12186635,12186724..12186814,12187229..12187365))
AA seq 713 aa
MEAKLSFSQDSPPISIISAAKVAGVSLSIDPSLAAGSAPVLCFSSGESLRGINPILEYIA
QSSPSLHGRDAIESGHVVEWLEYAPTFLLGSEFEVACSFVDGYLMSRTFLVGHVLTIADI
TVWSNLAGIGQRWESLRKSKKYQNLVRWFNGIDSDYKDTLNEVIAAYVGKRGIGKSPAPN
LKEKVNDSKDPSAPEVDLPGAKFGEVCVRFAPEPSGYLHIGHAKAALLNKYFAERYQGRL
IVRFDDTNPSKESNEFVENLLKDIETLGIKYDAVTYTSDYFPKLMEMAEKLIKQGKAYVD
DTPKEQMRSERMDGVESKCRNNTVEENLSLWKEMINGSERGMQCCVRGKLDMQDPNKSLR
DPVYYRCNTDPHHRIGSKYKVYPTYDFACPFVDALEGVTHALRSSEYHDRNAQYYRILQD
MGMRRVEIYEFSRLNMVYTLLSKRKLLWFVQNKKVEDWTDPRFPTVQGIVRRGLKVEALI
QFILQQGASKNLNLMEWDKLWTINKKIIDPVCARHTAVLKDQRVIFRLTNGPEKSFVQIL
PRHKKFDGAGKKATTFTNRIWLDYADASAISKGEEVTLMDWGNAIIKEIKMENGVITELI
GELHLEGSVKTTKLKVTWLPDIDDLVPLSLVEFDYLISKKKLEEDENFLDNLNPCTRKET
LALGDANMRNLLRGEVIQLERKGYYRCDAPFVRSSKPVVLFAIPDGRQQASLN
NT seq 2142 nt   +upstreamnt  +downstreamnt
atggaggcgaagttatcgttttctcaggacagcccgccaatttccataatttctgctgct
aaggttgccggtgtctccctgtccatagatcctagtcttgctgcgggctcagcacccgtt
ctatgcttcagttctggagaatcactccgtggtatcaaccctattctcgagtacattgcc
caatcctctccaagcctccatggccgagatgctattgagtctggacatgttgttgaatgg
cttgaatacgcccccaccttccttttaggatcagaatttgaggttgcctgctcatttgtt
gatggatacttgatgtctcggacctttctggttggtcatgttttaacgattgctgatatc
actgtatggtcaaatctggctgggattggtcaacgatgggagagtctacggaaatcaaag
aaataccaaaatcttgtccgttggttcaatggcatagattcagactacaaagacacattg
aatgaggttatagctgcttatgttgggaaacgaggaattgggaaatcccctgcaccaaac
cttaaggaaaaggttaatgactcaaaggatccttcagctccagaagttgatctccctggt
gcaaaatttggagaggtgtgtgttcgctttgccccagagcccagtggttacctccatata
ggtcatgcaaaggctgcactcttgaacaagtactttgcagaaagatatcaaggtcgatta
attgttcgatttgatgacactaacccttcaaaagaaagcaatgagtttgttgaaaacctc
ctaaaagatattgagaccctgggaatcaaatatgatgctgtcacatacacatctgattat
tttccaaagctaatggaaatggctgaaaaactgattaagcagggaaaagcatatgttgat
gacacaccaaaggagcaaatgagaagtgagagaatggatggtgtggagtcaaagtgcaga
aataatactgtggaggaaaatctgtctctatggaaagagatgataaatggttctgaaagg
ggtatgcaatgctgtgtgaggggtaaacttgacatgcaggatcctaacaagtcccttcgg
gatccagtttactaccgttgcaacactgatcctcaccatcgtattggttcaaagtacaag
gtctatccaacttatgactttgcttgtccattcgttgatgcgctggagggagtgacccat
gctcttcgttccagtgaatatcatgacaggaatgcacaatactatcgaattcttcaagat
atggggatgaggagagtagaaatatatgagttcagcagattgaatatggtttatactctt
cttagcaagcggaagctgctttggtttgtgcagaacaagaaggttgaagattggacagac
cctcgtttccccactgttcaaggcatagtacgccgtggcttgaaagttgaggctttgata
caatttatactccaacagggtgcttcgaaaaatttgaatcttatggagtgggataaactc
tggacaatcaacaagaaaataattgacccagtttgtgcaaggcatactgctgtgttgaaa
gatcagcgtgtgatcttcaggcttactaatggtccagagaaatcatttgttcaaattttg
ccaaggcacaagaaatttgatggtgcaggaaagaaggcaacaaccttcacaaacagaatt
tggctagattatgctgatgcatctgcaattagcaagggtgaggaagttactctgatggac
tggggaaatgccatcattaaagaaatcaagatggagaatggagtaattactgaactgatt
ggagaactacatcttgagggatctgtgaagacaacaaaattgaaggttacatggcttccg
gacatagatgatctggttcctctctcattggtggaatttgattacctgattagcaagaag
aagcttgaggaggatgagaacttccttgacaacctgaacccatgcactcggaaagaaacc
ctggccctaggagacgcaaatatgaggaacctcctgcgtggggaggtcatacagcttgag
aggaaaggctattacaggtgcgatgccccttttgtcagatcctcgaagccggtggttttg
ttcgctatccctgatggtcgacagcaggccagtttgaactag

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