KEGG   Oryza sativa japonica (Japanese rice): 4348547
Entry
4348547           CDS       T01015                                 
Name
(RefSeq) protein OPAQUE1
  KO
K10357  myosin V
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:osa00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    4348547
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4348547
   04131 Membrane trafficking [BR:osa04131]
    4348547
   03029 Mitochondrial biogenesis [BR:osa03029]
    4348547
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:osa04812]
    4348547
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Cargo complex
     4348547
   mRNA cycle factors
    P-body specific factors
     4348547
Membrane trafficking [BR:osa04131]
 Others
  Actin-binding proteins
   Myosins
    4348547
Mitochondrial biogenesis [BR:osa03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Retention of mitochondria
    4348547
Cytoskeleton proteins [BR:osa04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Myosins
     4348547
SSDB
Motif
Pfam: Myosin_head DIL IQ TSC22 Myosin_N AAA_16 AAA_22 Zeta_toxin nSTAND3 AAA_lid_6
Other DBs
NCBI-GeneID: 4348547
NCBI-ProteinID: XP_015613351
UniProt: Q8LSS8
LinkDB
Position
10:complement(join(13883193..13883334,13883430..13883512,13883601..13883681,13883792..13883848,13883949..13884005,13884077..13884176,13884267..13884337,13885092..13885229,13885347..13885523,13885977..13886126,13886205..13886375,13889214..13889297,13889373..13889417,13889510..13889600,13889808..13889926,13890276..13890497,13890693..13890791,13891434..13891553,13892429..13892634,13893144..13893321,13893765..13893825,13894993..13895102,13895189..13895320,13896199..13896372,13896471..13896597,13896671..13896708,13897436..13897537,13897628..13897685,13898134..13898235,13898303..13898449,13899086..13899222,13899319..13899468,13900166..13900322,13900678..13900736,13901045..13901201,13901272..13901417,13906240..13906383,13906541..13906669))
AA seq 1506 aa
MLFRPGTAVWVEHPDHAWAEAVVTSPASSSPSSVTVTLAGGAKAVVDGKKVLPRDTEADL
GGVDDMTKLVYLHEPGVLCNLARRYGFNEIYTYTGRILIAVNPFAKLPHLYDMHMMEQYR
GVQFGELSPHVFAVTDASYRAMVSEDRSQSILVSGESGAGKTETTKLIMRYLTFVGGRST
GDIRSVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDKSGRISGAAVRTYLLER
SRVVQISESERNYHCFYQLCASGQDADKYKLAHPRNFNYLNQSHTYELEGVNEAEEYLKT
RRAMDIVGISFSHQEAIFRTVAAILHLGNIEFSPGKEFDSSAIKDEKSKFHLQMAADLLM
VDGSLLLSTLCYRTIKTPEGNIVKAVDSSAAAISRDALAKTVYAQLFDWLVDNINMSIGQ
DMESRALIGVLDIYGFECFKYNSFEQLCINFANEKLQQHFNKHVFKMEQEEYKTEEINWS
YIEFVDNQDILDLIEKKPIGIVSLLDEACMLGKSTHETFAMKLFQNFKAHPRLEKPKLSK
TDFALSHFAGKVIYQTELFLEKNRDYVNLEHQNLLCSSKCSFLSRLFALQQDDPSKSSYK
FSSIASRFKQQLQALMETLSSTEPHYIRCVKPNSLNYPQKFENGSVLQQLRSGGVLEAIR
ISLAGYPTRRTYTEFIDRFGLLVPEHMDERFDEKSLTEKILRQLHLENFQLGRTKVFLRA
GQIAVLDSKRTEILEKAARIVQGRFRTFVACKEFHSTKKASVSLQAYCRGCLARNLLDAK
RQIAAAVSVEKYARRWFCRCEYLHLRSSALVIQSGVRYMLAIQKLLQLKNNKAATIIQAL
WRMKKLYDFHRQYRHATILIQCCWRQKLAKRAFRNLKQAAYETGALREAKGKLERSLEDL
TLRFTLERRQRVAAEESKALEVSKLLKIVESLKCELEAANEEKINGCKEVASMQQQLGLS
IKDQELLHSNLAQIEELKRENTLLKGKNAEMEQELLKAQKCSHDNMDKLHGVERNYLHLR
DNLKNLEDKISNLEDENHLLRQKALSLSPRHSRTMSHPIGSSPCSPKSLIESSPVKIVPL
PHNPTELRRSRMNSERHEEYHELLQRCIKDDMGFKKGKPVAACVIYKCLLHWGVFEAERT
TIFDFIIQNINTVLKTENENDILPYWLANASALLCLLQRNLRSKGFIAAPSRSSSDPHLC
EKANDALRPPLKAFGQRNSMSHIDAKYPAMLFKQQLTASLEKIFGLIRDNLKKEISPLLS
LCIQAPKLARGGSGRRSRSPDVTLQQPISAHWDRIIKFLDSLMDRLHKNFVPSFFIRKLV
TQVFSFINVQLFNSLLLRRECCTFSNGEYVKTGLCVLEKWILDATEEHAGAAWDELKYIR
EAVEFLIIAQKSKRTLEQIKKNICPALSVRQIYRLCTMYWDDKYGTHSVSAEVVAKMRDM
VSSDAQNPVSNSFLLDDDLSIPFTTEEIAEEVPDIDMSNIEMPSSLRHVHSAQFLMQHLQ
TTYPLR
NT seq 4521 nt   +upstreamnt  +downstreamnt
atgctcttccgccccggcaccgctgtgtgggtggagcacccggaccatgcgtgggccgag
gccgtggtcacatcccccgcctcctcctcgccgtcctccgttactgtcaccctcgccggc
ggcgccaaggctgtggtcgatgggaagaaagtcctgccgagggacacggaggccgacctc
gggggcgtcgacgacatgaccaagctggtctacctccacgagcctggggtgctctgcaat
ctcgctcggcggtatgggttcaatgaaatctatacatacacggggcgtattttaatcgca
gtaaacccctttgcgaagctacctcatctttatgatatgcacatgatggagcagtacaga
ggcgtgcagtttggtgaattgagtccacatgttttcgctgttacagatgcatcatacaga
gctatggttagtgaggaccgcagccagtccatattagtcagtggagaaagtggtgctgga
aaaacagagaccacaaagcttattatgcgatatcttacttttgttgggggccgttcaaca
ggtgatataagatctgtggagcaacaagttctagaatcaaatccactgttggaggcattt
ggtaatgcacggacggtgaggaatgataactccagtcgctttgggaaatttgttgagatt
caatttgacaaatcaggtagaatatcgggagctgcagttcgaacttatcttctggaaagg
tctcgtgttgtacagatatctgagtctgaaaggaattaccactgtttttatcaactttgt
gcatctgggcaggatgcagataaatacaaacttgctcaccctaggaactttaactaccta
aatcaaagccatacatatgagttagaaggtgtcaacgaagcagaggaatatttgaaaaca
cggagagcaatggatattgttggtataagtttttctcaccaggaagccatattccgaact
gttgctgctatccttcatctaggaaatattgaattttctcctgggaaagagtttgattca
tctgctatcaaggatgaaaagtctaaattccatctccaaatggctgctgatttgctcatg
gttgatggaagccttttgctttcaactctgtgctatcgcacaattaaaactcctgaagga
aacatcgtcaaggcagttgacagttctgctgctgcaattagtcgtgatgctttggcaaag
actgtatatgctcaattgtttgattggcttgttgacaatattaatatgtccattggacaa
gacatggagtcgagggcactaattggggtattagatatctatggttttgagtgttttaaa
tataatagttttgagcagctgtgcatcaactttgcgaatgaaaaacttcaacagcacttt
aataagcatgttttcaagatggagcaagaggaatacaaaacagaagaaatcaattggagc
tacattgaattcgttgataatcaagacatattggatctcattgaaaagaaaccaattggg
attgtttcacttctggatgaagcatgcatgcttggaaaatcaacacatgagacctttgca
atgaagctatttcagaattttaaagctcatccgcgtctggaaaagccaaagctctcaaag
acagattttgccctctcgcattttgctggaaaggtgatataccaaactgagttatttttg
gagaagaaccgagattatgtaaatttggagcatcagaatcttctttgttcttccaaatgc
tcattcctttctaggctctttgctttgcaacaagatgacccatcaaaatcatcttataag
ttttcttctatagcttctcggtttaagcaacaactccaagcgcttatggaaacactcagc
tcaacagaacctcactacattcgttgtgtaaaaccaaattctctgaactatcctcagaaa
ttcgagaatggaagtgtactacagcaactacgtagtgggggtgtgcttgaggctattaga
ataagtcttgctggttatccaacaaggaggacatataccgaattcattgatcgctttgga
cttcttgttccagaacatatggatgaaaggtttgatgagaaatcgctgacagaaaaaata
ctaaggcaattacatcttgagaactttcaacttggcagaacaaaagtttttctcagggct
ggccagattgctgttttggactccaaacgtaccgagattctggaaaaggctgccaggata
gttcagggtcgctttcgaacctttgttgcttgcaaggagtttcattctactaagaaagct
tctgtttctctccaagcatattgccgagggtgtttggcacgaaatttgcttgatgctaag
agacagatagcagcagctgtttcagtagaaaagtatgctcggagatggttctgtcggtgt
gaatatttgcatctccgttcttcagctcttgttatccagtctggtgttcgctatatgcta
gcaatccagaaattgctgcaattgaagaataataaagctgctaccattatccaggccttg
tggagaatgaagaagctctatgatttccatcggcaataccgacatgcaacaattctgatc
cagtgttgttggagacagaagcttgctaaaagggcatttcggaaccttaaacaagctgca
tatgagactggagctttgcgtgaagcaaaagggaaacttgagaggagcttggaagatctt
actttgcgattcaccctagaaaggaggcagagggtagctgcagaagagtcgaaggcacta
gaagtctctaagcttctcaaaatcgtggaatcattaaaatgtgagttggaggcagccaat
gaagaaaaaattaatggttgcaaggaagttgcatcaatgcaacaacagttagggttatca
atcaaggatcaagaacttcttcacagcaatcttgctcagatagaagaactaaagagggaa
aatactttactaaaggggaagaatgcagaaatggaacaagagctcttgaaagcccaaaaa
tgcagccatgataatatggacaagcttcatggcgtggaaagaaattatctgcatcttcgg
gacaacttgaaaaacttggaggataagatctcaaatttagaagatgagaaccatttattg
aggcagaaggccttaagcttatctcctaggcatagccgcaccatgagccatcctattggg
tcttccccatgcagcccaaagtcattgattgaatcttcacctgtaaagatcgtgcctctc
ccgcacaacccgacagagttaagaagatcaagaatgaactcagaaagacatgaggagtac
catgaacttctacagcggtgcatcaaggatgatatgggattcaagaagggaaaaccagtc
gctgcatgtgtcatttacaaatgtcttctccattggggagtattcgaggctgaaagaaca
actattttcgacttcataattcagaacatcaatacagttctgaagacagaaaatgagaat
gatattctgccttactggctagccaatgcatctgcccttttatgtctgttgcaaagaaac
ttacggtcaaaaggattcatcgcggcgccttctagatcttcttcagatcctcacttatgt
gaaaaggcaaatgatgctctcagaccacctttgaaagcttttggacaacggaatagcatg
tcgcatatagatgctaaatacccagctatgttgtttaagcaacaactaactgcttccttg
gagaagatatttggcttaatccgtgacaatcttaagaaagagatatcacctcttttgagc
ctctgcattcaagcaccaaaacttgctcgaggaggcagtggaaggaggtcgagatcgcct
gatgtgaccttgcagcaaccaataagtgctcactgggatcggattataaaatttttggac
tcattgatggacaggctgcataaaaactttgtgccttcttttttcattcgcaagctagta
actcaagttttctccttcataaatgtacaattgttcaatagcttgctcctacgacgggag
tgttgcacattttcaaatggagaatatgtgaaaactgggctctgtgtactggagaaatgg
attctggatgctacagaagagcatgcaggtgcagcttgggatgagctaaagtacatcaga
gaggcggttgaatttctgattattgcacagaaaagcaaaaggactcttgagcagattaag
aaaaatatttgtccggcgttaagtgtgaggcagatatatcgtctatgtacgatgtactgg
gatgacaaatatggtacccacagtgtatcagccgaggttgttgccaaaatgagggacatg
gtgagcagcgatgcacaaaatccagtgtcaaattcatttctcttggatgacgacttgagc
attcctttcacgacagaggagatagcagaggaagtaccggacatagacatgtcaaacatc
gagatgccctcatcacttcgtcatgtacactctgctcagttcctgatgcagcaccttcag
acaacgtacccgctaagatga

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