Oryza sativa japonica (Japanese rice): 4348618
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Entry
4348618 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
osa03009
]
4348618
Enzymes [BR:
osa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
4348618
Ribosome biogenesis [BR:
osa03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
4348618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
DUF3253
Motif
Other DBs
NCBI-GeneID:
4348618
NCBI-ProteinID:
XP_015613175
UniProt:
B9G5Q9
Q338C6
LinkDB
All DBs
Position
10:complement(join(15136967..15137047,15137199..15137372,15137765..15137807,15137999..15138143,15138223..15138331,15138612..15138740,15138853..15138949,15139557..15139621,15140193..15140357))
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AA seq
335 aa
AA seq
DB search
MASLLRLQALALNLTAPRRLPFLPLRVTTATAPLAGRLSTAAASGSSPESPASEPDLDSG
LYLVATPIGNLEDITLRALRILKCADVILSEDTRHSGKLLQHYNIKTPLLSFHKFNERER
EPNILKRLHEGEAVALISDAGTPGISDPGMELARLCATEGIPVIPIPGPSAAIAALSASG
LPTDEFTFVGFLPKHARSRKERLEISACQAATQIFYVPPHGIHQFLSDAASSFGDSRSCV
IAREITKLHEEFWRGTIGEANEAFATRQPKGEITVLIEGKLISADETPSEDFLEHELREL
MTQGHPLSAAVKMVSEATSAKKKDVYALALRLFGK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctgctccgcctccaggccctcgccctgaacctaacggcaccccgccgcctc
cccttcctccctctccgcgtcacgactgcgacggctccgctcgccggccgcctctccacc
gccgccgcctctggcagctcgccggagtcacctgcctcggaaccggatttggattccggg
ctgtatcttgtggcaacgccaatcgggaacctcgaggatatcaccttaagggcattgcgt
atcctcaaatgtgctgatgtcatactatcagaagacacaaggcattctggaaagctactt
caacattataacatcaagacacctcttctcagctttcataagtttaatgagcgtgaaaga
gagcctaatatcttaaagagacttcatgaaggggaagcagttgcattgattagtgatgct
ggtactcctggaattagtgatcctggcatggaactggctagactatgtgctactgaggga
atccctgttatccccattcctgggccgtctgctgcaatagctgctctttctgcatctggt
ttgccaactgatgaatttacatttgtggggtttttaccaaagcatgctcgatcaagaaaa
gaaaggcttgaaatatctgcctgtcaagctgccacacaaattttctatgttcctccccat
ggaattcaccaatttctttctgatgctgcttcatcatttggtgattctaggtcatgtgtt
attgcaagggagataacgaaattacacgaagagttttggcggggaactattggtgaagca
aatgaagcctttgcaactcggcagccaaagggagaaattacagtgctcatagagggaaag
ttaatttcagctgatgaaactccatctgaggatttccttgagcatgaactcagagaattg
atgacgcagggacatcctctgtcagcggcagtgaaaatggtgagtgaagctacatcagca
aagaagaaggatgtttatgccctcgcattaaggttatttggaaaatga
DBGET
integrated database retrieval system
