Oryza sativa japonica (Japanese rice) (RefSeq): 4348723
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Entry
4348723 CDS
T01015
Name
(RefSeq) transcription factor-like protein DPB
KO
K04683
transcription factor Dp-1
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
4348723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4348723
03036 Chromosome and associated proteins [BR:
osa03036
]
4348723
Transcription factors [BR:
osa03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
4348723
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
4348723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
4348723
NCBI-ProteinID:
XP_015614876
UniProt:
Q84VD5
Q0IXG1
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All DBs
Position
10:complement(15812771..15817929)
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AA seq
346 aa
AA seq
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MVSGAAHSASTSGGGGGSEGSPTGRAAPGMQGGGSAATPAASASASTPASETTVARRLDG
LDIQGDDAPSSQPATSKKKKRGPGTRATGPDKGGRGLRQFSMKVCEKVESKGRTTYNEVA
DELVAEFADPNNNFASPDPDNPNTPQFDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKG
LPRTSMSDVEELKTEIIGLKGRIDKKNAYLQELEDQFVGLQNLAQRNEQLYGSGNAPSGG
VALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDSFVLKALGFSGKEPDDTQA
WVGNGGECSTTPIYHQSPQVARPNGVRLPTSPPIPGILKGRVKHEH
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggtctccggcgcggcgcattcggcctccaccagtggcggcggcggggggagcgagggc
tcccccaccggccgcgccgcgccgggcatgcagggcggcggcagcgccgccacgcccgcc
gcctcggcctccgcgtccacgccggccagcgagaccaccgtcgcccgccgcctcgacggc
ctcgacatccagggcgacgacgcgccctcgtcgcagcccgccacgagcaagaagaaaaaa
agggggcctggaacacgtgcaacgggccctgacaagggtggccgtggattgcgccaattt
agtatgaaagtttgtgagaaagttgaaagcaaagggagaacaacctacaacgaggtggca
gatgagcttgtagctgagtttgcagaccccaacaataattttgcatcacctgatcctgac
aaccctaacacaccacaatttgatgagaaaaatatacgacgaagggtttatgatgcattg
aatgtcctgatggctatggatattatatctaaggataaaaaggaaattcagtggaagggc
ttgcctcggacaagtatgagcgatgttgaagaattgaagacagagatcatcggactgaaa
ggtaggatcgacaagaaaaatgcatatttgcaggagttagaagatcaatttgtaggtctt
caaaacttggcacagcgaaacgagcagctttatggttcaggaaatgctccttcaggagga
gtggcattgccatttatattggtgcagacacgtcctcatgctacagtagaagtggagata
tcagaagatatgcagctggtgcattttgatttcaatagcactccatttgaactgcatgac
gattcctttgtactgaaagcattggggttctctggcaaagaaccagatgatacgcaagcc
tgggttggaaatggaggtgagtgctcaaccacacctatctatcatcaatcaccccaagtt
gcgaggccaaacggagttagactaccaacatcgccccctattcccggtatacttaaaggg
cgtgtcaagcatgaacattag
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