KEGG   Oryza sativa japonica (Japanese rice): 4348725
Entry
4348725           CDS       T01015                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07887  Ras-related protein Rab-5A
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04144  Endocytosis
osa04145  Phagosome
osa04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    4348725
   04145 Phagosome
    4348725
   04148 Efferocytosis
    4348725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4348725
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4348725
   04031 GTP-binding proteins [BR:osa04031]
    4348725
Membrane trafficking [BR:osa04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    4348725
 Endosome - Lysosome transport
    4348725
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   4348725
  Exosomal proteins of other body fluids (saliva and urine)
   4348725
  Exosomal proteins of colorectal cancer cells
   4348725
  Exosomal proteins of bladder cancer cells
   4348725
GTP-binding proteins [BR:osa04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    4348725
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA GTP_EFTU RsgA_GTPase ATPase MMR_HSR1 AAA_7 MMR_HSR1_Xtn AAA_16
Other DBs
NCBI-GeneID: 4348725
NCBI-ProteinID: XP_015614942
UniProt: Q337T4 Q0IXF9
LinkDB
Position
10:join(16533295..16533472,16535247..16535320,16535445..16535528,16535642..16535736,16535925..16536030,16536719..16536808,16536922..16537008,16537162..16537200)
AA seq 250 aa
MLRVPEQLSHRSSCNLRAETHLHPVAGLPPPPPPLALLRLTRPPAPPDPPAMGCSSSLPA
NNAGGVGTISNENSGTDLKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFL
SQTLALEDSTTVKFEIWDTAGQERYAALAPLYYRGAGAAIVVYDITSSESFNKAQYWVKE
LQKHGSPDMIMALVGNKADLHDNRSVSSQDAQEYAERNTMFFIETSAKTADNINQLFEEI
AKRLPRPTPS
NT seq 753 nt   +upstreamnt  +downstreamnt
atgctgcgtgtccccgagcagctgtcgcacagaagcagttgcaacctgcgagcggaaacc
cacctccaccccgtcgccggcctgccgccgccgccgccgccgcttgccctcctccgcctt
actcggcctccggcgcctcctgaccccccggccatgggttgctcttcgtctctgccagct
aataatgctggaggggtaggtactatcagcaacgagaattctggtactgatctgaagaac
ttgcgagtgaagttggtattgcttggagattcaggtgttgggaaaagttgcattgttctt
cgctttgtccgtggtcagtttgaccccacttcaaaggtgactgttggtgcatcatttttg
tcacaaacattggcgttggaggattccacaacagtaaagtttgaaatatgggatactgct
ggtcaggagaggtatgctgcattggcacctctttactaccggggagctggtgccgcaatt
gttgtgtatgacataacaagttcagaatcatttaacaaggcacaatactgggtgaaggaa
cttcagaaacacggtagtccagatatgatcatggctttggttggaaataaggctgatcta
catgacaatcgtagtgtatcctctcaggatgcacaagagtatgcagagaggaacactatg
tttttcatcgagacatcagcgaaaacggctgataacataaaccaactattcgaggaaatt
gcgaagaggttgcccaggccaacaccatcctga

DBGET integrated database retrieval system