KEGG   Oryza sativa japonica (Japanese rice): 4348824
Entry
4348824           CDS       T01015                                 
Name
(RefSeq) chaperonin CPN60-1, mitochondrial
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    4348824
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4348824
   03110 Chaperones and folding catalysts [BR:osa03110]
    4348824
   03029 Mitochondrial biogenesis [BR:osa03029]
    4348824
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4348824
Enzymes [BR:osa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     4348824
Messenger RNA biogenesis [BR:osa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     4348824
Chaperones and folding catalysts [BR:osa03110]
 Heat shock proteins
  HSP60 / Chaperonin
   4348824
Mitochondrial biogenesis [BR:osa03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    4348824
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   4348824
  Exosomal proteins of other body fluids (saliva and urine)
   4348824
  Exosomal proteins of breast cancer cells
   4348824
  Exosomal proteins of colorectal cancer cells
   4348824
  Exosomal proteins of bladder cancer cells
   4348824
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 4348824
NCBI-ProteinID: XP_015614634
UniProt: B9G648 Q8H903 Q7G2N7
LinkDB
Position
10:join(17714820..17714857,17714976..17715000,17715604..17715735,17716039..17716198,17716771..17716946,17717039..17717134,17717268..17717372,17717455..17717541,17717631..17717720,17717790..17717870,17717957..17718025,17718170..17718247,17718335..17718430,17718738..17718837,17718965..17719068,17719153..17719258,17719352..17719430,17719618..17719720)
AA seq 574 aa
MYRAAASLASKARQAGSSARQVGSRLALSRNYAAKDIKFGVEARALMLRGVEELADAVKV
TMGPKGRNVVIEQSYGSPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGDGT
TCATVLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKGMARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIADGNTLYNELEVVEGMKLDRGYISPYFVTNPK
TQKCELDDPLILIHDKKVSNLHAVVKVLELALKKQRPLLIVAEDVESEALGTLIINKLRA
GIKVCAVKAPGFGENRKANLQDLAILTGGEVITEELGMNLEKFEPQMLGTCKKVTVSKDD
TVILDGAGDKKSIEERAEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLPTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLEQDNTDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLMTTTESIIVEIPKEEKEAPAMGGMGGMDY
NT seq 1725 nt   +upstreamnt  +downstreamnt
atgtaccgcgcggccgccagcctcgcctccaaggctcggcaagccgggagcagcgctcgc
caggttggaagcaggcttgccttgagcaggaactatgctgccaaggatatcaagtttgga
gttgaggcccgtgctttgatgctgaggggtgttgaggagttggcagatgcagtcaaagtg
acaatgggtcctaagggacgcaatgtggttattgagcagagctatggttcaccgaaagtc
acaaaggacggtgtgactgttgccaagagcattgagttcaaggatagagtcaagaatgtt
ggtgcaagccttgtaaagcaggttgctaatgcgaccaatgatactgctggagatggtacc
acttgtgctactgtattgactaaagcaatatttactgaggggtgcaagtctgttgctgct
ggcatgaatgcaatggatttaaggcgtggtatttcaatggctgttgatgctgttgtaact
aacctaaagggcatggctagaatgatcagcacatcagaggaaatagctcaggtgggcaca
atatcagcaaatggggaaagggaaattggtgagcttattgcaaaggctatggagaaggtt
ggcaaggagggtgtaatcaccattgcggatggtaacaccctttacaatgagcttgaagtt
gtggaaggcatgaaacttgacagaggctacatctctccttactttgttaccaacccaaag
acccagaaatgtgaactggatgaccccttgatcctgatacatgacaagaaggtttcgaac
ctgcatgcagtagttaaagtcttggagttggctctgaagaagcaaaggcctctgctgatt
gttgctgaagatgtagagagcgaggcattgggtactctgattattaacaagcttcgtgca
ggcatcaaggtctgtgctgttaaagctcctgggtttggggagaacaggaaagcaaactta
caggaccttgcgatccttactggaggagaagtcataactgaagagctaggaatgaatctt
gagaagttcgagcctcagatgttgggtacatgcaagaaggtaactgtatctaaggacgac
actgttattcttgatggagctggagacaagaaatccattgaagagagggctgagcagatt
agatctgcaattgagctaagcacttctgattatgacaaggaaaagctacaggagcggttg
gcaaagctctccggaggtgttgctgttctaaagatcggaggagccagtgaagctgaagtt
ggtgagaagaaggatagagtgacagatgcattgaatgccactaaagctgctgtggaagag
ggtattgtaccaggtggaggtgttgcacttctttatgcatcaaaggagctggataaattg
ccgactgctaactttgatcaaaagattggtgtacaaatcattcagaatgctttgaagaca
ccggtgcacactattgcttccaacgcaggtgtagaaggggctgttgttgtcggtaagctt
ttggaacaagataacaccgaccttggctatgatgcggctaaaggtgaatatgtggacatg
gtgaaggctggtatcattgacccactaaaagtgatcagaactgccttggtggatgctgca
agcgtatcatctctgatgacaaccacggaatccatcatcgtagagatcccaaaggaagag
aaggaggcgccagcgatgggaggcatgggtggaatggattactaa

DBGET integrated database retrieval system