Oryza sativa japonica (Japanese rice): 4348867
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Entry
4348867 CDS
T01015
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
4348867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4348867
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
4348867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
4348867
NCBI-ProteinID:
XP_015614245
UniProt:
Q7XDI5
A0A5S6RDD7
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All DBs
Position
10:join(18097677..18097898,18097976..18099148)
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AA seq
464 aa
AA seq
DB search
MESDQGKLFIGGISWETTEEKLRDHFAAYGDVSQAAVMRDKLTGRPRGFGFVVFSDPSSV
DAALVDPHTLDGRTVDVKRALSREEQQAAKAANPSAGGRHASGGGGGGGGAGGGGGGGGG
DAGGARTKKIFVGGLPSNLTEDEFRQYFQTYGVVTDVVVMYDQNTQRPRGFGFITFDAED
AVDRVLHKTFHDLSGKMVEVKRALPREANPGSGSGGRSMGGGGGGYQSNNGPNSNSGGYD
SRGDASRYGQAQQGSGGYPGYGAGGYGAGTVGYGYGHANPGTAYGNYGAGGFGGVPAGYG
GHYGNPNAPGSGYQGGPPGANRGPWGGQAPSGYGTGSYGGNAGYAAWNNSSAGGNAPTSQ
AAGAGTGYGSQGYGYGGYGGDASYGNHGGYGGYGGRGDGAGNPAAGGGSGYGAGYGSGNG
GSGYPNAWADPSQGGGFGASVNGVSEGQSNYGSGYGGVQPRVAQ
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggatcaggggaagctgttcatcggcggcatctcgtgggagaccaccgaggag
aagctccgcgaccacttcgccgcctacggcgacgtctcccaggccgccgtcatgcgcgac
aagctcaccggccgcccccgcggcttcggcttcgtcgtcttctccgacccttcctccgtc
gacgccgccctcgtcgacccccacaccctcgacggccgcacggttgatgtgaagcgggcg
ctctcgcgggaggagcagcaggccgcgaaggcggcgaaccctagcgcgggggggaggcac
gcctccggtgggggcggtggtgggggaggcgccggtggtggtggtggtggcggcggtggt
gacgccggcggtgcgcggacgaagaagatcttcgtcggcgggctgccctccaacctgacg
gaggacgagttccggcagtacttccagacctacggggtcgtcaccgacgtcgtcgtcatg
tacgaccagaacacgcagcggccgagggggttcgggttcatcaccttcgacgcggaggac
gccgttgaccgcgtgctgcacaagaccttccatgacctgagcgggaagatggtggaggtg
aagcgcgccctgcccagggaggccaaccctggctccggcagtggtggccgttccatggga
ggcggcggtgggggttaccagagtaacaatgggccgaactccaattctgggggctatgat
agcagaggtgacgctagcaggtatggtcaggcgcagcagggtagtggtggttatcccggt
tatggtgctggaggatatggtgctggtacggttggttatggatatgggcatgctaaccct
ggaactgcgtatgggaattatggggctggaggatttggaggtgttcctgctgggtatggt
gggcattatggcaatccaaatgcgcctggttcaggttaccagggtggtcctccaggagca
aacagaggaccatggggtggtcaagctccgtctggttatggcactgggagttatggtggc
aatgcaggctatgctgcttggaacaactcttctgctggaggtaatgcacccactagtcag
gccgctggtgcaggcacaggctatgggagccagggctatggatatggtggatatggagga
gatgcatcgtatggtaatcatggtggatatgggggttatggaggaaggggagatggtgct
ggcaatccagctgctggcggtggatctgggtatggtgctggctatggaagcgggaatggc
ggttctggttatccaaatgcttgggctgatccttcacaaggtggagggtttggggcttca
gtcaatggagtgtctgaaggccaatcaaattatggcagtggttatggtggtgtgcaacct
agggttgctcagtaa
DBGET
integrated database retrieval system
