KEGG   Oryza sativa japonica (Japanese rice): 4348871
Entry
4348871           CDS       T01015                                 
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1 isoform X1
  KO
K21843  tetratricopeptide repeat protein 7
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4348871
Membrane trafficking [BR:osa04131]
 Endocytosis
  Others
   EFR3-PI4KIII alpha complex and associated proteins
    4348871
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C DEAD HA2_N AAA_22 nSTAND3 NACHT BEX ABC_tran Rad17 DUF5128 AAA_19
Other DBs
NCBI-GeneID: 4348871
NCBI-ProteinID: XP_025876436
LinkDB
Position
10:complement(join(18142014..18142145,18142522..18142890,18143368..18143554,18143817..18144009,18144114..18144387,18144465..18144624,18145235..18145449,18146034..18146126,18146543..18146695,18146784..18146987,18147666..18147941,18148586..18148681,18148835..18149038,18149127..18149226,18149479..18149624,18150126..18150455))
AA seq 1043 aa
MLVHSSARRLLVSRGGGSGSGSFFPFAAAANACSRRALAPVSASAMSYRGGGGGRRGGGG
GPNSQRGRGRGGGGAGRGGGGGGRGGGGRGEQRWWDPQWRAERLRQMAGEVEKVDENEWW
NKIRQLREGSQQELVVKRNFGRDGQNILADMAQRQGLYFNVYNKGKTIVFSKVPLPDYRA
DLDERHGSTQQEIRMSNETERRVESLLAKAKSNSNDSASTSTLTTRQSRPSTSSSVTEST
KDIDKERLSSELRDIQNSRKMMPSARSMQSFRDKLPAFKMREEFLKAVAANQVLVISGET
GCGKTTQLPQFILEEEIDNLRGADCSIICTQPRRISAISVAARIASERGEELGDTVGYQI
RLESKRSAQTRLLFCTTGVLLRRLVQEPDLVGVSHLLVDEIHERGMNEDFLIIILRDLLP
RRPDLRLVLMSATINAELFSKYFGEAPIMHIPGFTFPVTELFLEDILEKTRYKINSERDN
FQGNSRRKRLASVKSDPISDAFEDVDIYKEYGNYSVATRQSLEAWSATELNLSLVEGTIE
YICRHEGEGAILVFLTGWDEISKLLDKIKGNNLLGNSNRFLVIPLHGSMPTVNQREIFDR
PPANMRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQR
RGRAGRVQPGACYRLYPKVIYDAMPQFQLPEILRTPLQELCLTIKSLQLGAVASFLAKAL
QPPDPLSVNNAIELLKTVGALDDVEELTSLGRHLCTLPLDPNIGKMLLIGSVFQCLDPAL
TIAAALAYRNPFVLPIDRKEEADAVKRSFAGDSCSDHIALVKAFEAWKEARRSGRERSFC
WENFLSPMTLQMMDDMRNQFFDLLSDIGFVSKTRGLKAYNYYGKDLEMVCAVLCAGLYPN
VVQCKRRGKRTAFYTKDVGKVDIHPSSVNAGIHQFPLPYLVYSEKVKTASIYVRDSTNIS
DYALLLFGGSLSESKTGEGIEMLGGYLHFSAPRRIIELIQRLRGELDKLLQRKIEEPALD
IFSEGKGVVAAAVELLHSQNVHH
NT seq 3132 nt   +upstreamnt  +downstreamnt
atgctcgtccactcctccgctcgccgcctcctcgtctcccgcggcggcggcagcggcagc
ggcagcttcttccccttcgcggcggcggccaacgcttgctcacgcagagccctcgctcct
gtatccgctagcgccatgtcctaccgcggcggaggcggcgggcgtcgcggcggcggtggg
ggcccgaactcccagcgcgggcgcgggcgtggaggtggtggagcggggaggggaggggga
ggaggagggcgtggcggcggtgggagaggggagcagaggtggtgggacccgcagtggcgc
gccgagcggctccggcagatggccggcgaggtggaaaaggtcgatgagaacgagtggtgg
aacaagataagacaattaagagaagggtctcagcaggagctagttgttaagcggaatttt
gggcgtgatggacaaaacatactggcagatatggctcagagacaagggctttacttcaat
gtgtacaacaaagggaagacaattgttttcagcaaagttccactacctgattatcgagca
gaccttgatgagagacatggatcaacacaacaagagattaggatgtctaatgagactgag
agacgagtggagagccttttggccaaggcaaagtcaaatagtaatgattctgcaagcaca
tctactctaacaacgaggcaatctcggccaagcacatcttcgtcagtaactgaatcaaca
aaagatattgataaagaaaggctcagttctgagcttagggatatacagaactcaaggaag
atgatgccaagtgctaggtcgatgcaatcttttagggataaactaccagcattcaaaatg
agagaggagtttttaaaagcagtagcagccaatcaggttctagtaatttctggtgagaca
ggctgtggtaaaacaacacagcttccacagttcatactagaagaggagatagataacctt
cgtggtgctgattgtagcataatatgtactcagcctcgccgtatatctgccatatcggtt
gcagctcgtatagcatctgagaggggtgaagagcttggcgataccgttggataccagatt
cgccttgaatcgaaacgatctgcacaaaccagactgctattctgcaccacaggagttcta
cttagaagattggttcaggagccagacttagttggtgtaagccatttactagttgatgaa
attcatgaacgtggcatgaatgaagattttctcatcataattcttcgcgaccttctgcca
aggcgtccagacctccgccttgtattgatgagtgcaaccataaatgcagaacttttttcc
aaatattttggagaggcaccaattatgcatatcccgggcttcacatttcctgttaccgag
ttgtttttggaagatattttagagaagacccggtacaagatcaattctgaacgtgacaat
tttcaagggaactcaagaagaaagaggcttgcatcagttaagagtgatccaatatctgat
gcttttgaggatgttgacatttataaggaatatggaaattacagcgttgcaactaggcaa
tcccttgaagcttggtcggctaccgaactaaatttgagccttgttgaaggtacaattgag
tacatctgtcgtcatgaaggagaaggtgcaatccttgtgttccttactggttgggatgaa
atttcgaaacttttggataagattaaggggaataatctccttggaaattccaatagattc
ctggttattccactccatggttctatgcccactgtcaatcagcgtgaaatttttgataga
ccaccagccaatatgaggaaaattgttttggcaacaaatattgcagaaagcagtattaca
atagatgatgttgtctatgtaattgattgtggcaaagcaaaggaaacaagttatgatgcc
ttaaataagcttgcatgccttctaccatcatggatatcaaaagcttctgcccatcagagg
cgaggtcgtgcaggacgtgttcagcctggtgcttgctataggctgtatcctaaagtcatt
tatgatgcgatgccacagtttcagttacctgaaattcttaggactcctttgcaagagctc
tgtcttactatcaaaagcttacagcttggagctgtagcctctttcttagccaaggcactg
cagccaccagacccgctttctgttaataatgcgatcgagcttttgaaaaccgttggagca
ttggatgacgtggaggagctgacttctttagggcgacatctttgtacacttccgctagat
ccaaacattggaaaaatgctgcttattggatctgtttttcagtgtctggatcctgcatta
acaatcgctgctgctcttgcatatcgtaatccatttgtgctcccaatagataggaaagaa
gaagctgatgctgtcaaaagatcatttgctggtgactcctgcagtgatcacattgctctt
gttaaggcgttcgaagcatggaaggaagcaagacgcagtggaagagaacgctctttctgc
tgggaaaatttcctttcacccatgaccctgcagatgatggatgacatgcgtaatcagttt
tttgatctactatctgacattgggtttgttagcaaaacaagaggattgaaggcatataat
tattatggaaaggatctggagatggtatgtgctgtcctatgtgctgggctttacccaaat
gtcgttcagtgcaaaagacgaggcaagaggacagcgttttacaccaaagatgttggcaaa
gtggatatccatccatcatcagtcaatgcgggaattcaccaattcccattgccttatctg
gtttatagcgagaaggttaaaactgctagcatttatgtcagggattccacaaacatttcc
gactatgctcttctcctctttggtggttctctcagtgagagcaaaactggagaaggcatt
gagatgcttggggggtatcttcatttctctgcaccaaggcgtatcatagagttgatccag
agattaagaggtgaattggacaaactcctccagaggaagatcgaggagcctgcacttgac
atattttctgaaggaaaaggcgttgtggcggcagcagtagaactgctgcacagccaaaac
gttcaccactag

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