Oryza sativa japonica (Japanese rice): 4348949
Help
Entry
4348949 CDS
T01015
Name
(RefSeq) thioredoxin-like protein YLS8
KO
K12859
U5 snRNP protein, DIM1 family
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4348949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4348949
Spliceosome [BR:
osa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
4348949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DIM1
Thioredoxin
Thioredoxin_7
Thioredoxin_8
DUF3192
Motif
Other DBs
NCBI-GeneID:
4348949
NCBI-ProteinID:
XP_015612821
UniProt:
Q7X873
Q7F0N0
LinkDB
All DBs
Position
10:join(19080050..19080169,19082146..19082454)
Genome browser
AA seq
142 aa
AA seq
DB search
MSYLLPHLHSGWAVDQAILAEEERLVIIRFGHDWDETCMQMDEVLAAVAETIKNFAVIYL
VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY
RGARKGRGLVIAPKDYSTKYRY
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtaccttctgccgcatctgcactcggggtgggcggtggaccaggccatcctcgcg
gaggaggagcgcctcgtcatcatccgcttcggccacgactgggacgagacgtgcatgcag
atggatgaggtgctagcggcagtagctgagaccataaagaactttgcggtcatctacctg
gtcgacatcaccgaggttccagacttcaacaccatgtacgagctgtatgatccgtcgacg
gtgatgttcttcttccgcaacaagcacatcatgattgatctggggacaggaaacaacaac
aagatcaactgggccttgaaggacaagcaggagttcatcgacattgtggagaccgtctac
agaggtgctcgcaaagggcgtggtttggtgattgctcccaaggactactccactaaatac
cgttactaa
DBGET
integrated database retrieval system
