Oryza sativa japonica (Japanese rice): 4348952
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Entry
4348952 CDS
T01015
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4348952
04121 Ubiquitin system [BR:
osa04121
]
4348952
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4348952
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
4348952
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
4348952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
Anti-TRAP
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
4348952
NCBI-ProteinID:
NP_001409999
LinkDB
All DBs
Position
10:complement(19109693..19110805)
Genome browser
AA seq
370 aa
AA seq
DB search
MSNPAAYYAAVARKQYFCYQCNRTVLLPASAAAAGALSCPECRGDFIEEVNVPAPAIIPF
PFAFPPMMPTATSASAAAAAAASPTQSSSSSAATSPSSDLSAFLNSMLGPLNLRTDERMP
GTTSAAGTATPEDEPDGFDAVTFFQNYLQNLMDGGANIQVLLDDASVGLAPGIGRVGGAS
FGDYFVGPGLEQLIEQLTENDPNRYGTPPAAKSALSTLPDVVVTDAMVAAADGAECAVCK
EDFSPGEGAKQMPCKHIYHADCIMPWLDLHNSCPICRFELPTDDPDYEGRKKSNPQPTAG
VDAGAASGSSTAAEEREESGESARLVERRFNVSLPWPFSGLGSQTPQQDGSNGGAGASGS
KDGGASSDKK
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatccggccgcctactacgccgccgtcgcgcggaagcagtacttctgctaccaa
tgcaaccgcaccgtcctcctcccggcctccgccgccgccgccggggcgctctcctgcccg
gagtgccgcggggatttcatcgaggaggtcaacgtccccgcccccgccatcatccccttc
cccttcgccttccccccgatgatgcccaccgccacctccgcctccgccgccgccgccgcc
gcggcctcgccgacccagtcctcctcctcgtccgccgccacgtcgccatccagcgacctc
tccgccttcctcaacagcatgctcggcccgctcaacctccgcaccgacgagcggatgccg
ggaaccacctccgccgcgggcacggcgacccccgaggacgagcccgacgggttcgacgcg
gtcacgttcttccagaactacctccagaatctcatggacggcggcgccaacatccaggtc
ctcctcgacgacgccagcgtcggcctcgcccccggcatcggccgcgtcggcggcgccagc
ttcggggactacttcgtcggcccgggcctggagcagctcatcgagcagctcaccgagaac
gacccgaaccgctacggcacgccgccggcggccaagtcggctctctccacgctccccgat
gtcgtcgtgaccgacgccatggtcgccgcggcggatggcgccgagtgcgccgtctgcaag
gaggatttctcgcctggggaaggggccaagcagatgccctgcaagcacatttaccacgcc
gactgcatcatgccatggctggatctccacaattcatgccccatatgccgctttgagctg
cctactgatgaccctgattacgaggggcgtaagaaatcaaacccacagccaactgctggc
gttgatgccggagctgcatctgggagttctactgctgctgaggagcgagaggagagtggg
gagagtgcgaggttggtcgaacggcggtttaacgtgtcgctgccatggccttttagtgga
ttgggatcgcaaacgccgcagcaggatgggagcaatgggggcgctggtgccagtggctcg
aaggatggaggcgcatccagtgacaaaaaataa
DBGET
integrated database retrieval system
