Oryza sativa japonica (Japanese rice): 4348996
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Entry
4348996 CDS
T01015
Name
(RefSeq) KH domain-containing protein At4g18375
KO
K21444
poly(rC)-binding protein 3/4
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4348996
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
4348996
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
DUF4573
Motif
Other DBs
NCBI-GeneID:
4348996
NCBI-ProteinID:
XP_015613587
UniProt:
Q8LNT9
A0A0P0XVQ9
LinkDB
All DBs
Position
10:join(19506716..19507339,19507756..19508178,19508271..19508516,19508626..19509291,19509730..19509785,19509869..19509962,19510061..19510240)
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AA seq
762 aa
AA seq
DB search
MDHDRSRRHKSNTSRKRPHFNSDDGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSV
LGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDGFEDMKPH
CFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQL
RNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEE
IIDASTQRKHQAPPQLPHANPMLPHLHVDHSPQIPLLDPYRNRPLQYHSAEAEEFSIKIL
CASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIE
ALILLHSKVSTLAENHHLTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKP
KYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRDGSSSNNPTPFAPFDGPPVDILPN
REFMLYGRSANSPPYGGPPNDPPYGRPAIDPPYGRPAIDPPYGRPAIDPPYRRPANDTSY
GGLNNDGPRDPYTAYPVEYFSKREYPSGNSKVTPSASYDRYAATTRLPNRELPSSISPGA
DYMSRRSYLDQVPTDRYSSRGTLQLGLSRAGNSNVQQLGITRAGNSNAYDYTEAAEQIHG
REDYRRLSGLTGYPGGSVEFRIPNSYLESVIGAGGVNLAEIRQISGARVKLHEAHPGSSE
SIVEIQGIPDQVKAAQSLLQGFIGASSNSRQAPQSSRMAHYF
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggatcatgatagatctagaaggcataaatcaaatacttccagaaaaaggccacatttc
aattctgatgacggaaagaggaaacggctaaactcaaggcacgatgatggaaccatatct
tctgagccaatagaaaccatttacaggatactgtgtccggttaaaaagattggcagtgtc
ttgggaagaggcggtgatattgttaaggcactaagagacacaactaaagcaaagataagg
gtcgctgattccattcctggtgcagatgagagagtaattattatctttaactactcaagt
cagactgaagaagctgctcaaaatatttctactgatggatttgaggacatgaagcctcat
tgttttgcccaagatgccctgttgaagatacatgacaaaattgcagcagatgaagatctc
catgctggaattgttcatgaaaagtctgaaaatgttgatgatgtaattgctcgaattttg
gttccaggaaatcaagttggctgtcttctaggaaaaggtggctccattatacaacagcta
cgaaatgacactggagcagggatccgtgtcttaccatctgaaaatcttcctcagtgtgca
cttaaaagtgatgaattggtgcagatatctggatcttcttcccttgtaagaaaagctctc
tatgaaatatctactcgtctgcatcaacatcctcgtaaagacaatccacctctggaagaa
attatagatgcaagcacacaaaggaagcatcaggctccaccacaattaccacatgcaaat
ccaatgttgccacacctgcatgtggatcactcaccacaaatacccttgcttgatccatat
agaaacaggccactgcagtatcattctgctgaagctgaagagttctctattaaaattctg
tgtgcttctgaacacattggtcaagttattgggaaaagtggtggcaatgttcggcaagtc
gaacagcagacaggtgcttgcgttcaggttaaagaagttggcaaaaatgcttctgaagaa
aggttaattgttgtttcatctcaggagattccagatgatccagtgtctccaacaattgag
gcgcttattttgctccatagtaaagtaagtacacttgctgagaatcaccacttgacgaca
cggcttgttgtaccatcaaacaaagttggttgtattattggggaaggtggaaaggtaatt
actgaaatgagaagacggactggggctgaaatccgagtctactcaaaagcagataaacct
aagtacttgtcttttgatgaggagcttgtgcaggttgctgggcttccagctattgcaaga
ggagccctgacagagattgcttcgaggcttagaactaggacactcagagatggaagttct
tccaataatccgacaccttttgccccttttgatggtcctcctgttgatatcttgcctaac
agggaattcatgctatatggacgatctgccaatagtcccccatatggagggcctcctaat
gatccaccatatggaagacctgccattgatccaccatatggaagacctgccattgatcca
ccatatggaagaccagccattgatccaccatatagaagacctgccaatgatacatcatat
ggagggttgaacaatgatgggcctcgtgatccttacactgcgtatcctgtagagtacttc
tctaaaagagagtaccctagtggaaatagcaaagttacaccatctgcttcatacgacaga
tatgcagcaactactcgcttgcctaatagagaactgccctcatctattagtcctggtgcc
gattatatgtcccgccgttcttatcttgaccaagtacctactgataggtactctagtagg
ggtacactacaattaggcctctcgagagctgggaatagtaatgtgcaacaattaggaatc
accagagctggaaattccaatgcttatgattataccgaggccgctgagcagatccatgga
cgtgaggattaccgaagactgtcaggtctcactgggtatccaggtggctccgtcgaattt
cggattccaaatagttatctggaatctgtcattggagctggtggtgtcaatctagctgag
atccgtcagatctctggcgcgagagtgaagttgcacgaagcccatcccggttcttccgag
tccattgtggagatccagggcattccggatcaagtgaaagccgcacagagccttctgcaa
ggcttcatcggcgcaagcagcaacagcaggcaggcgccccagtcctctcgcatggcccat
tatttttag
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