Oryza sativa japonica (Japanese rice): 4349020 Help Entry 4349020           CDS       T01015                                  Name (RefSeq) protein STABILIZED1   KO K12855   pre-mRNA-processing factor 6 Organism osa  Oryza sativa japonica (Japanese rice) Pathway osa03040   Spliceosome Brite KEGG Orthology (KO) [BR:osa00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     4349020  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:osa03041]     4349020 Spliceosome [BR:osa03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     4349020  Complex C    U5 SnRNP specific factors     4349020 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_14 PRP1_N HAT_PRP39_N TPR_19 Suf HAT_PRP39_C HAT_Syf1_CNRKL1_C HAT_Syf1_CNRKL1_N TPR_16 TPR_2 TPR_CcmH_CycH NatA_aux_su ARM_TT21_C ARM_TT21 Sde2_N_Ubi_yeast TPR_1 PMC2NT Motif Other DBs NCBI-GeneID:  4349020 NCBI-ProteinID:  XP_015613825 UniProt:  Q8W3F7 A0A5S6R9Z8 LinkDB All DBs Position 10:complement(19703757..19706876) Genome browser AA seq 1039 aa AA seqDB search MVFVRAPDGRTHHVDLDPSTATLADLTASASRVCGGVPPEQLRLYLAHRRLLPAEPSPLL SSLRVSASSSLLLHLPLLGGMTGPTTTPAAPPPPPPPSAQPPARPARYDFLNSKPPPNYV AGLGRGATGFTTRSDIGPARAAPDLPDRSAAAAAAPAVGRGRGKPPGDDDGDDDGGDEEK GYDENQKFDEFEGNDAGLFSNADYDDDDREADAVWESIDQRMDSRRKDRREARLKQEIEK YRASNPKITEQFADLKRKLVDLSAQEWESIPEIGDYSLRNKKKRFESFVPVPDTLLEKAR QEQEHVTALDPKSRAAGGTETPWAQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGLTVVD PKGYLTDLKSMKITSDAEISDIKKARLLLKSVTQTNPKHPPGWIAAARLEEVAGKLQVAR QLIQRGCEECPTNEDVWVEACRLASPDEAKAVIARGVKAIPNSVKLWLQAAKLETSDLNK SRVLRKGLEHIPDSVRLWKAVVELANEEDARLLLHRAVECCPLHVELWLALARLETYDQA KKVLNKAREKLPKEPAIWITAAKLEEANGNTQSVIKVIERSIKTLQREGLDIDREAWLKE AEAAERAGSVLTCQAIVKSTIGIGVDEEDRKRTWVADAEECKKRGSIETARAIYAHALSV FVSKKSIWLKAAQLEKSHGTKESLYNLLRKAVTYNPRAEVLWLMSAKEKWLAGDVPAARA ILQEAYASLPNSEEIWLAAFKLEFENNEPERARILLSKARERGGTERVWMKSAIVERELG NVDEERKLLEEGLKLFPSFFKLWLMLGQMEDRLGHGSKAKEVYENALKHCPSCIPLWLSL ANLEEKINGLSKSRAVLTMARKKNPATPELWLAAVRAELRHGNKKEADALLAKALQECPT SGILWAAAIEMVPRPQRKAKSSDAIKRCDHDPHVIAAVAKLFWHDRKVDKARSWLNRAVT LAPDIGDFWALYYKFELQHGNADTQKDVLQRCVAAEPKHGERWQAITKAVENSHLSIEAL LKKAVLALGQEENPNAADP NT seq 3120 nt NT seq  +upstreamnt  +downstreamnt atggtgttcgtccgcgcgccggacgggaggacccaccacgtcgacctcgacccctccacc gccacgctcgccgacctcacggcctccgcctcccgcgtctgcggcggcgtcccgccggag cagctgcggctctacctcgcccaccgccgcctcctcccggccgagccgtccccgctgctg tcctccctccgggtctcggcctcctcctccctgctactccacctccccctgctcggaggg atgaccggcccgacgacgacccccgcggcacccccgcccccgccgccgccgtcggcgcag ccgcccgcccgccccgcgcgctacgacttcctcaactccaagccgcccccgaactacgtg gccggtctggggcgtggcgccaccgggttcaccacccgttcggatatcgggccggcccgc gcggcgcccgatctgcctgaccggtccgccgccgccgccgccgcccccgccgtcgggcgc ggccgtgggaagccacccggggacgacgacggcgacgacgatggcggcgacgaggagaag gggtacgacgagaaccagaagttcgacgagttcgagggcaacgacgccgggctgttctcc aacgccgactacgacgacgacgaccgcgaggcggatgcggtctgggagagcatcgaccag aggatggactctcgccggaaggatcggcgggaggcgcggctgaagcaggagatcgagaag taccgtgcttccaaccctaagatcaccgagcaattcgctgatttgaagcgtaagttggtc gatttgtcggcgcaggagtgggaaagcatacctgaaattggggactactcgctgcgcaac aagaagaagcgatttgagagcttcgttcccgtgccggacaccctgctcgagaaggctcgg caggagcaggagcatgtcacggcactggatcccaagagccgtgcagctggtggcaccgag acgccatgggcgcagactccggttaccgatctgacggctgtgggcgaaggtcgtggcacc gtgctctccttgaagctggacaggttgtcggattcggtatctggtcttactgttgttgat ccaaagggttacttgacggacctgaaaagtatgaagattactagtgatgctgagatttct gacattaaaaaggcgcgattgttgcttaagtcagtgacacagacaaacccgaagcatcca ccaggatggattgctgctgctaggcttgaagaggttgctggcaagcttcaggttgctcgg cagcttatccagcgtggctgtgaggagtgccccacaaatgaggatgtttgggtcgaggca tgccggctggccagcccagacgaggcaaaggcagtgattgctaggggcgtgaaggcaatt cccaattctgtgaagctgtggttgcaggcagcaaagttggaaactagtgatttgaataag agcagggttttgagaaaagggttggaacacattcctgattcagtcagactgtggaaagca gtagtagagcttgcaaatgaggaggatgcaagactgttgcttcacagggctgtggagtgc tgcccactccatgtggaactgtggcttgccctagcaaggctggagacatatgaccaagca aagaaggtacttaacaaggcaagagaaaagcttcctaaggaacctgccatctggattaca gctgcaaagctggaggaagctaatggaaacacccagtcagtaatcaaggtgattgagaga agtataaaaactttacagagagaaggattggatattgacagggaggcatggctaaaggaa gcagaagctgctgagcgtgctggatctgtattgacttgccaggctattgttaagagcact attggcattggtgttgatgaggaagacagaaaacgcacatgggttgccgatgctgaggaa tgcaagaagcgtggttcaattgagacagcccgtgccatctatgcgcatgcactcagtgtc ttcgtttccaagaagagtatttggctgaaagcggctcagcttgagaagagccatggaacc aaggagtctctttataatctcctcagaaaggctgttacctacaatccacgtgcagaagtt ttatggcttatgagtgcaaaggagaaatggctggctggagatgtcccggctgcccgagcc attcttcaggaagcttatgcttctctccccaattcagaggagatctggctagctgccttc aagcttgagtttgagaacaatgaaccagagagagcaagaattcttttgtcaaaggccagg gaaagaggaggcactgagagggtctggatgaaatctgcgattgttgaaagggagttaggg aatgtagacgaagaaaggaagctgttggaggaaggtctgaagttattcccctcattcttc aagctgtggttaatgcttggacaaatggaagaccggcttggccatggatccaaggcaaag gaggtttacgagaatgcactgaagcactgcccgagttgcatccctctttggctctctcta gctaatctagaggagaagataaatggcttgagcaagtcacgtgctgtcctcaccatggca agaaagaagaacccagctacacctgaactctggcttgcagcagttagggctgaattgaga catgggaacaagaaggaagctgatgctctactagccaaggcattacaggaatgcccgaca agtggtattttgtgggctgcagctatagagatggtgccacgtccccagcgtaaagcaaag agctcagatgctataaaacgatgtgaccatgatccccatgtcattgcagctgtggccaaa cttttctggcatgataggaaggttgataaagctagaagttggttgaatagagctgttact cttgctccagacattggagatttttgggccttgtactacaaatttgaactgcaacatgga aatgctgatacacaaaaggatgtcctacaaagatgtgttgcagcagaaccaaagcatgga gagagatggcaagcaataacaaaggctgttgagaactcacatctgtcaattgaggccctt ctgaagaaagctgtgttggctcttggccaggaagaaaatccaaatgctgcagatccctag

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