Oryza sativa japonica (Japanese rice): 4349074
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Entry
4349074 CDS
T01015
Symbol
OsYAB4, OsYABBY3, YAB3
Name
(RefSeq) protein YABBY 3
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4349074 (OsYAB4)
Transcription factors [BR:
osa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
4349074 (OsYAB4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
HMG_box
Ccdc124
Zn_ribbon_12
Zn_ribbon_5
PRIMA1
Motif
Other DBs
NCBI-GeneID:
4349074
NCBI-ProteinID:
NP_001410010
LinkDB
All DBs
Position
10:complement(join(20160935..20161030,20162430..20162507,20162773..20162848,20163454..20163502,20164038..20164236,20164342..20164566,20164672..20164890))
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AA seq
313 aa
AA seq
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MSSSSSSSASSAAAAAFRPAVVQREQQVVEEKFPAAAAAMREMVLPPVAAAAADSEQEQL
CYVHCHYCDTVLVVSVPSSSLFETVTVRCGHCSSLLTVNMRGLLLPTTAAAAPPPPPPPP
PPPPPPAAHFPHSLNLAPANPPHHHSLLDEISTANSPTQLLLEQHGLGGLMASAASCRNN
NSPAAAAAPPPPTSQGKAAAKEPSPRTNTAVINRPPEKRQRVPSAYNRFIKDEIQRIKAG
NPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGLKKTSLLPQDHQRKDGLLKEGLYAAAA
AAAAAANMGVAPY
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcgtcctcgtcgtcggcgtcgtcggcggcggcggccgcgtttcggccggct
gttgtgcagcgggagcagcaggtggtggaggagaaattccccgcggcggcggcggcgatg
cgggagatggtcctcccgccggtggcggcggcggcggcggactccgagcaggagcagctc
tgctacgtgcactgccactactgcgacaccgtgctcgtcgtgagcgtgccgagcagcagc
ctgttcgagacggtgacggtgaggtgcggccactgcagcagcctcctcaccgtcaacatg
aggggcctcctcctcccgaccaccgccgccgccgcgccaccaccacctcctcccccgccg
ccgccgccgccgccgccggccgcgcacttcccccactcgctcaacctcgcgccggccaac
cctccccaccaccactccctcctggatgagatatcgacggcgaactccccgacgcagctg
ctgctggagcagcacggcctcggcggcctcatggcgagcgcggcaagctgcaggaacaac
aactccccggcggcggcggcggctccgccgccgccaacgtcgcaggggaaagcggcggcg
aaagagccgtcgccccggacgaacaccgccgtcatcaacagacctccggagaagaggcag
cgtgtgccatcggcgtacaaccgcttcatcaaggacgaaatccaacgcatcaaggctggc
aatcccgacatctcgcacagggaggccttcagcgcggctgccaagaactgggcacacttt
ccgcacatccactttggactgatgccggatcaccaggggctcaagaagaccagcctgctt
cctcaggatcatcagagaaaggatgggctactaaaggaagggctttatgcagcggcagct
gctgctgcggcggcggccaacatgggtgttgcaccgtactaa
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