Oryza sativa japonica (Japanese rice): 4349406
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Entry
4349406 CDS
T01015
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4349406
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
4349406
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-GeneID:
4349406
NCBI-ProteinID:
XP_015612742
UniProt:
Q7XC34
A0A8J8YKK3
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All DBs
Position
10:join(22966691..22966996,22967748..22968003,22968551..22968705,22968783..22969055,22969288..22969482,22969573..22969764)
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AA seq
458 aa
AA seq
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MADPAAAAAAAEFGDPDSPPAPAAEEAEAAAAVGEEAVPAAEAAAAKRWPGWPGDSVFRL
VVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVLVSGKEDPALELPPAMD
ALMRVFKRVSGITDGAAEGTQAATAPGVCAARLLVPGAQAINLIGKQGASIKAIQEGTGA
TIRVISIDERERPFYVIEDERIVEIQGETEKVLKALQAVSNHLRKFLVDHSVLPLFEKTN
ATVTQDRSTDAWTDISHPSIVSAQINQPPPVVDEYILPMKRDPLFLEREPLIDHNIHRSG
VSLYGRDPALSTLRTSGIHGGGPGGPLLSQITQTMQIPLTYAEDIIGVKGANIAYIRANS
GAVVTIQESLGSPDDITVEMKGTSSQVQAAYQLIQDSLAAHRDSVRSSYAGLDPVYRPSY
SQYGSSTYPSSSLPSYSSMDGGGYSSSGLGGYGSSYRY
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccagccgctgccgccgccgccgccgagttcggggatcccgattcgccgccc
gcgccggccgccgaggaggccgaggcggctgcggcggtgggggaggaggcggtcccggcg
gcggaggccgcggcggcgaagaggtggcccgggtggcccggggacagcgtgttcaggctc
gtggtccccgtgctcaaggtcgggagcatcatcgggaggaagggggagctcatcaagcgc
ctcgtcgaggagaccaaggccaaggtccgcgtcctcgagggccccgtcggcgccaccgag
cgcattgttcttgtgtctgggaaagaagacccagccttggagcttcctccagctatggat
gctctcatgagagtttttaagcgtgtcagtggtataacagatggagctgctgagggcaca
caggcagctactgcacctggtgtatgtgctgcccgtttgttggttcctggagctcaggca
attaacctaattgggaagcaaggtgcttcaattaaggccatccaagagggcactggtgct
acaatacgggttatatcaatagatgagcgagagcgacctttctatgtaattgaagatgaa
aggatagttgagatccagggggaaacagagaaagtcctaaaagcacttcaagcagtttct
aatcatctccggaagtttttggttgaccatagtgtacttccattgtttgagaagactaat
gctacagtaactcaagatcgcagcactgatgcttggactgatatatcacatccttcaatt
gtttctgcacaaataaaccaaccacctcctgtggttgatgaatatattcttccaatgaag
agagaccctctgtttctcgaacgggaaccattgatagaccacaatattcatcgctcaggt
gtttcgctttatgggcgggatcctgccttgtcaacattacgaacctctggaatacatggt
ggtggacctggtggccctctactttcacagataactcaaacaatgcaaattccccttacc
tacgctgaagacataattggagtgaaaggagcaaatattgcatacatacgagctaacagt
ggtgcagtcgtcacaattcaagagagtttggggagccctgacgatattactgttgaaatg
aaggggacatcatcacaagtacaagctgcctatcaactcatccaggattctctggcggca
catagggattctgtcaggagcagctatgcaggattagatccagtatataggccaagctat
tcacagtatggcagctcgacctatccgtcgtcgtcattgccatcgtattctagcatggat
gggggtggatattcgtcttcaggtctcggtggatatgggtcatcttaccggtactaa
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