| Entry |
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| Name |
(RefSeq) replication factor C subunit 3
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| KO |
| K10756 | replication factor C subunit 3/5 |
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| Organism |
osa Oryza sativa japonica (Japanese rice)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:osa00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4349480
03410 Base excision repair
4349480
03420 Nucleotide excision repair
4349480
03430 Mismatch repair
4349480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:osa03032]
4349480
03036 Chromosome and associated proteins [BR:osa03036]
4349480
03400 DNA repair and recombination proteins [BR:osa03400]
4349480
DNA replication proteins [BR:osa03032]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
4349480
DNA Replication Termination Factors
ELG1-RFC complex
4349480
Chromosome and associated proteins [BR:osa03036]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
4349480
DNA repair and recombination proteins [BR:osa03400]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
4349480
Check point factors
HRAD17(Rad24)-RFC complex
4349480
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
10:complement(join(23511594..23511667,23511791..23511929,23512038..23512118,23512212..23512281,23512387..23512482,23513102..23513238,23513314..23513492,23513704..23513866,23513986..23514018,23514114..23514224,23514334..23514945))
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| AA seq |
564 aa
MAPPATTLSDALDHDRRRDARRYRTFLPPSQLVLGLHRLGFACIPRSGAPLTRPRTAPSS
VPHQPPPRREAPQPQVANAAVAERRPLREREEAAAAAAAAAKRIHDHHTPAESKAEAASE
PQVSAGDHSTQSSDHSASAVAVGRGGSIWVRVLPKSVAMVDSPQTSEESTPTAEDKYIWA
DKYRPNFLNDFICNKDAALELYNQVTAQECNHIIFEGPTSVGKRSMVSALIWDAFATDNL
KIEEQTKRFELKGEIAKHIDIRVKISSHHVEVNLADIHGYEKHVITTLLNESIPSPNSIC
SHANCRVIVVHDADKLSSDLQHYIGWFLGRYVGCNKIMFCCSDASNLEAVRHLCKVVTLK
PPSSDEIIKVLEYIAVQESIDLPRDIARRITMSSGNNLRQAIRSFEATWKANYAFLEGHA
ILTGWEEEISNVAKKILEEPSPKQLYVIRGKIRKLIEHNVSPYFIFSNLVAELKRDRDEE
FQNSIDQLASELNHIKDCARQKEQCESGDTGLEIRNINIEGFAKEGHDQRETIQCFIKIE
EFTVRFMGFYRSLKAKNMNRGGVL |
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| NT seq |
1695 nt +upstreamnt +downstreamnt
atggctcccccggccaccaccctctccgacgcgctcgaccatgaccgccgccgcgacgcc
cgacgctaccgtaccttcctgccgccgtcgcagctcgtgctcggtctccaccgcttgggc
ttcgcttgcatccccagaagcggcgcccccctcacccgcccccgcaccgcccctagctcc
gtgccccaccaaccgccgccgcgccgggaggcgccccagccgcaggtagccaatgccgcc
gtcgccgagaggaggcctttgagggagagagaggaagccgccgccgccgccgccgccgcc
gccaaacgcatccacgaccaccacacgccggctgaatccaaagctgaagctgcttctgag
ccacaagtgtccgccggcgaccacagcacgcagagctccgaccacagcgcctccgccgtc
gccgtcgggagaggagggagcatctgggtccgggttttgcccaaatcggtcgccatggtg
gattcgccacagacttctgaagaatccacacccacggcagaggacaagtacatctgggca
gacaagtatcgccccaatttcctcaacgatttcatctgcaacaaggacgctgcccttgag
ctctacaaccaggttaccgcacaagaatgcaaccatatcatatttgaaggcccgacctcc
gtcggaaagaggagcatggtgtcggcactcatatgggatgcttttgctactgataatctc
aagatagaggaacagacaaagagattcgagctgaagggagaaattgcaaaacacattgat
atcagagtgaagatttcaagtcatcatgtggaggtaaatttggctgacatacacggctat
gagaagcatgtcattactactttgttgaatgaatccatcccatcaccaaactccatttgc
agtcatgccaactgcagagtgatcgtcgtccacgacgctgataaactctcatctgatctt
caacattatattggatggtttctggggaggtatgtaggatgcaataaaatcatgttctgc
tgttctgatgcttcaaaccttgaggctgtcaggcatctctgcaaggttgtgacacttaag
ccaccttcatctgatgagataatcaaggtcctagagtacattgcagtgcaagagagcata
gatctgcctcgtgatattgctaggagaataacaatgagctcaggcaataatctccgacag
gcaatacgttcttttgaagctacttggaaagcaaactatgccttcctagaaggccatgcc
attttgacaggatgggaagaggaaatctccaatgtagccaaaaaaatcttggaggaacca
agcccaaaacagctgtatgtcattaggggtaagatcagaaaactgattgaacataatgtg
tcaccttacttcattttctctaatctggttgctgaactgaaaagggacagggatgaggag
ttccaaaatagcattgatcaactagcatcggagttgaaccatatcaaagattgcgcgcgt
caaaaagagcagtgcgaatccggcgacacgggtttggaaatcagaaacataaatatagaa
ggttttgccaaggagggccatgaccaacgcgaaactatccaatgctttataaagattgaa
gagttcactgtgaggttcatgggcttctacagatctttaaaagcaaagaacatgaataga
ggaggtgttctataa |
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