Oryza sativa japonica (Japanese rice): 4349525
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Entry
4349525 CDS
T01015
Symbol
APG8D, ATG8D
Name
(RefSeq) autophagy-related protein 8D isoform 1
KO
K08341
GABA(A) receptor-associated protein
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
4349525 (APG8D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4349525 (APG8D)
04121 Ubiquitin system [BR:
osa04121
]
4349525 (APG8D)
03029 Mitochondrial biogenesis [BR:
osa03029
]
4349525 (APG8D)
Membrane trafficking [BR:
osa04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
4349525 (APG8D)
Ubiquitin system [BR:
osa04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
4349525 (APG8D)
Mitochondrial biogenesis [BR:
osa03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
4349525 (APG8D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG8
APG12
Motif
Other DBs
NCBI-GeneID:
4349525
NCBI-ProteinID:
NP_001410048
LinkDB
All DBs
Position
11:complement(join(42631..42722,42810..42928,42999..43051,45185..45240,45336..45372))
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AA seq
118 aa
AA seq
DB search
MKPRPFKEEFTLEERAKESAAMIASYPDRIPVIVEKFSRSNLPEMEKRKYLVPCNMPVGQ
FIFILRSRLHLSPGTALFVFVNNTLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccaggcccttcaaggaggagttcaccttggaggagagggccaaggagtcggcc
gccatgatcgcctcctaccccgacaggatccctgtcattgttgagaaattttcgaggagt
aatcttccagaaatggagaagcgcaagtacctggttccatgtaacatgccagttgggcag
tttattttcatacttcgttccaggctacatttgtctccagggacagcgttgtttgtgttt
gtcaacaacactttgccccagactgctcagctgatgggcagtgtgtatgagtcatacaaa
gatgagggcgatggcttcctctacttgtgctacagcagcgagaagacattcggttga
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integrated database retrieval system
