KEGG   Oryza sativa japonica (Japanese rice): 4349546
Entry
4349546           CDS       T01015                                 
Name
(RefSeq) clathrin heavy chain 1-like
  KO
K04646  clathrin heavy chain
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04142  Lysosome
osa04144  Endocytosis
osa05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:osa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    4349546
   04142 Lysosome
    4349546
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    4349546
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4349546
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4349546
Membrane trafficking [BR:osa04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    4349546
Exosome [BR:osa04147]
 Exosomal proteins
  Proteins found in most exosomes
   4349546
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B
Other DBs
NCBI-GeneID: 4349546
NCBI-ProteinID: XP_015616901
UniProt: Q2RBN7
LinkDB
Position
11:join(275924..275968,276078..276282,277276..277364,277473..277551,277687..277814,278022..278120,278211..278319,278559..278638,278722..278949,279026..279091,279228..279344,279781..279978,280090..280206,280299..280358,280471..280557,280662..280745,280872..281006,281085..281147,281227..281331,281420..281532,281620..281872,281961..282097,282216..282494,282597..283599,283693..284178,284266..284436,284529..284714,285065..285187,285269..285379,285473..285643)
AA seq 1708 aa
MAAANAPIAMREALTLTSLGIAPQFVTFTHVTMESEKYICVRETSPQNSVVIVDMAMPAQ
PLRRPITADSALMNPNTRILALKAQIPGTTQDHLQIFNIEAKTKIKSHQMPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGDSEPAKMFDRTANLANNQIINYRCDPSEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAASFASFKVVGNENPSTLICFASKTTNAGQITS
KLHVIELGAQPGKPGFSKKQADLFFPPDFQDDFPVAMQISQKYGLIYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTAESSASGGFYAINRRGQVLHATVNDATIVPFVSSQLNNLEL
AVNLAKRANLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGLLRTPETVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTYPNVADAILANGMFSHYDRPRVAQLCEKAGLYLRALQHYTELPDIKRVMVNTHAI
EPQALVEFFGTLSREWALECMKDLLLVNLRGNLQIVVQAAKEYSEQLGVDACIKLFEQFK
SYEGLYFFLGAYLSSSEDPDIHFKYIEAAARTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPFYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWDKVLQPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYVNRLDNFDGPAVGEVAVEAQLFE
EAFAIFKKFNLNVQAVNVLLDNIRSIERAEEFAFRVEEDAVWSQVAKAQLREGLVSEAIE
SFIRADDATHFLDVIRAAEEANVYDDLVKYLLMVRQKAREPKVDGELIFAYAKIDRLSDI
EEFILMPNVANLQNVGDRLYDEELYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPDAWDHMQFKDVAVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRLDHTRVVDIMRKAGQLHLVKPYMVAVQSNNVSAVNEALNELYVEEEDYERLRESVDM
HDNFDQIGLAQKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGD
RELSEDLLVYFIEQGKKECFASCLFICYDLIRADVALELAWMNNMVDFAFPYLLQFIREY
TSKVDELVKDRIESQNEVRAKEKEEKDLVAQQNMYAQLLPLALPAPPGMGGPPPPMGMPG
MPPMGGMGMPPMGPGPMPAYGMPPMGSY
NT seq 5127 nt   +upstreamnt  +downstreamnt
atggcggcggccaacgcccccatcgccatgcgcgaggccctcacgctcaccagcctgggg
atcgcgccccagttcgtcaccttcacccacgtcaccatggagtcggagaaatacatctgc
gtccgcgagacctccccgcagaacagcgtcgtcatcgtcgacatggccatgcccgcgcag
cccctccgcaggcccatcaccgccgactccgccctcatgaaccccaacacccgcatcctc
gccctcaaagctcaaatacctgggacaacacaggatcacctgcaaatcttcaacattgag
gctaaaacaaaaattaagtcccaccagatgcctgagcaggttgtgttttggaaatggatc
accccaaagttgttgggtttggtaacacaaacatcagtttatcactggtcaattgaggga
gattctgaaccggccaagatgttcgataggacggctaatttggccaacaatcaaattatc
aactatcgatgtgatccatctgagaagtggcttgtgcttattggaattgcacctggtgct
ccagagaggccacaactggtgaagggaaatatgcaacttttttctgtggatcagcaacgt
agtcaggcacttgaagcccatgcagcatcctttgcatcatttaaggtcgtgggcaacgag
aacccttcaactctcatctgctttgcctcaaagacaactaatgctgggcagatcacttct
aagttgcatgttattgaattgggtgcccagccagggaaaccagggttttccaagaagcaa
gctgatcttttcttccccccagattttcaggatgattttcctgtggccatgcagatctct
cagaagtatggccttatctatgtaattacgaagcttggccttttatttgtatatgacttg
gaaacagctgcagcggtctatagaaatagaattagtccagatcctatattcttgacagca
gagtcttctgcaagtggtggtttttatgccatcaataggagaggacaggttttacatgcc
acagttaatgatgcaaccattgtgccttttgtcagcagtcaattaaataaccttgaacta
gctgtaaatcttgccaaaagagctaatcttcctggggcagagaacttagttgtgcaaagg
tttcaagaattgtttgcacaaacaaaatacaaggaagcagctgagttggctgcagaatct
cctcaaggtcttctccgaactcctgagactgttgcaaaatttcagagtgttcctgttcaa
gctgggcaaacgcctccactcttgcagtactttggcacattgctaactcgggggaagctc
aatgcttacgagtctcttgagctatctcgacttgttgtcaatcagaacaaaaagaacctt
ttggaaaactggttggctgaagacaaattggagtgcagtgaagaacttggagatcttgtc
aagactgtggacaatgatcttgctctgaaaatatacataaaggctagggcaacccctaaa
gttgttgccgcttttgctgaaagaagggaatttgacaagatccttatatattcaaagcag
gttggatacacccctgactacctcttcctcctccagaccattttacgtacggatccacag
ggagctgtcaactttgcgctcatgatgtcacaaatggaggggggctgtccagttgattac
aatactataactgatctcttccttcagagaaacatgatacgtgaggcaacagctttcctg
ctggatgttttaaagccaaacttgccggagcatgcttttcttcaaaccaaggttttggag
atcaacttggtcacttacccaaatgttgctgatgccatccttgctaatggtatgttcagt
cattatgatcgccctcgtgttgctcagctttgtgaaaaggctggcttgtacttgcgagct
ctccagcattacacagaattaccagatatcaagcgtgtcatggtgaatacccatgccatt
gagccacaggcacttgttgagttctttggcactctttcaagagagtgggctttggagtgc
atgaaggaccttctgctggtcaatctaagagggaatcttcaaattgttgtacaggctgcc
aaagaatactctgagcagctaggggttgatgcttgcataaaactgtttgagcaattcaaa
tcttacgagggcctttactttttcttgggagcttatttgagttccagtgaggatccagat
attcatttcaaatacatagaagcagctgctaggactggacagatcaaagaagttgaacgt
gtaaccagggaatccaacttttatgatgcggagaagacaaagaactttttaatggaagcg
aaactgcctgatgcccgtccgctgattaatgtctgcgaccgctttggatttgttccagat
ttgacccactatctgtatacaaataatatgcttcggtatattgaaggctatgtacagaaa
gtgaaccctggaaatgctccattagttgttggacagctacttgatgatgagtgccctgaa
gatttcattaagggtttgattctgtctgtccgttctctccttcctgttgagccactagtt
gatgaatgcgagaagaggaaccgcctacggctgctgacacaatttttggagcacttagtg
agcgagggtagccaagatgtccatgtgcacaatgctcttggaaaaatcatcattgacagc
aacaataatcctgagcacttccttaccaccaatccattttatgactctcgcgtggtcggt
aaatactgtgaaaagcgggatcctacccttgctgttgttgcttacagacgtggacagtgt
gatgatgaacttattaatgtcaccaataaaaactcactgttcaagctgcaagctaggtat
gtggttgaaagaatggatggtgatctgtgggataaagttctacagcctgaaaatgaatat
agaaggcaactcattgaccaagtggtttctacggctttgcctgaaagcaagagccccgag
caagtgtctgctgctgttaaggctttcatgacagctgatcttccccatgaactgattgaa
cttcttgaaaagatcgtccttcagaattctgctttcagtggaaacttcaatctgcagaac
cttctcatcttgacagccatcaaggctgacccatccagggtcatggactatgtcaacagg
ctggacaactttgatgggcctgctgttggagaagtagcagttgaagcacagctgtttgag
gaggctttcgctatcttcaagaagttcaacttaaatgtgcaggctgtcaatgttctattg
gacaacatccgaagcatagaaagagctgaagagtttgcattccgtgttgaagaagatgct
gtttggagccaggttgccaaggcccagttgcgtgaaggtttggttagtgaagcaattgag
tccttcattcgtgcagatgatgcaacacatttcctcgacgtcatccgtgctgctgaggaa
gctaatgtatacgatgatctagttaagtacttgcttatggtaaggcagaaggcaagggaa
cccaaagttgatggagaactcatctttgcgtatgctaagattgatagactcagtgatatt
gaagagttcattctcatgccaaatgttgccaatcttcaaaatgttggtgatcgtctgtat
gatgaagaactttatgaagcagcaaagatcatctatgccttcatctcaaactgggctaag
ctggctgttacccttgttaagctgaagcagttccaaggtgctgtggatgctgctcgcaag
gctaacagtgctaaaacatggaaggaagtctgctttgcttgtgttgatgccgaggagttc
cggctagcacaaatatgtggtctcaatattattgtccaggttgatgatttggaggaagta
agtgaatactaccagaacagaggatgtttcaatgaacttatttccctcatggaaagtggt
ctaggactggagcgtgctcacatgggcatcttcacagaattaggagtcctctatgctaga
tatcgccctgagaagctcatggaacacatcaaacttttctccacacgtctcaacattcct
aagcttatccgtgcttgtgatgaacagcagcactggaaagagcttacttacctatacatc
cagtatgatgaatttgacaatgctgccaccactattatgaaccattctccggatgcatgg
gatcatatgcaatttaaggatgttgctgttaaagttgcaaatgttgagctatactacaag
gcagtgcacttctatctgcaagagcatcctgatctcatcaatgaccttctcaatgtactt
gcgcttcgtttggatcatacaagagtcgtggacataatgcgcaaggctggtcagttgcat
cttgtgaaaccatacatggttgcagttcagagcaacaatgtctctgctgtgaatgaagct
ttgaatgagctttatgttgaagaggaggactatgagagactccgtgaatcggttgatatg
catgacaactttgatcagataggtcttgcccaaaagcttgagaagcatgaattgcttgag
atgaggaggatcgctgcctacatttacaagaaggctggcagatggaagcaatctattgcc
ctgtcgaagaaagacaacatgtacaaggattgcatggagacatgctcacagtctggtgac
cgcgagctgtcagaagatttgcttgtctatttcattgaacagggaaagaaagaatgcttt
gcttcttgtctctttatttgttatgacttgatccgtgcggatgttgctcttgagcttgca
tggatgaacaacatggtggactttgcattcccctatctgttacagttcattcgggagtac
acaagcaaggttgatgagctagtgaaggacaggattgaatcacagaatgaagtaagggct
aaagagaaggaagaaaaagatcttgttgctcagcagaacatgtatgcccaattgcttcct
ctcgccttgcctgctccacctggtatgggcggtcctccaccgccaatggggatgccgggc
atgcctccgatgggcggaatggggatgcctccgatgggtcccggacctatgccagcatat
gggatgcctccaatgggaagctactga

DBGET integrated database retrieval system