Oryza sativa japonica (Japanese rice): 4349670
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Entry
4349670 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K15559
regulator of Ty1 transposition protein 103
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osa03021
]
4349670
Transcription machinery [BR:
osa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
4349670
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Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
ALIX_LYPXL_bnd
POL2_thumb
CREPT
CSN7a_helixI
Motif
Other DBs
NCBI-GeneID:
4349670
NCBI-ProteinID:
XP_015617827
UniProt:
Q2RB13
A0A8J8Y0S1
LinkDB
All DBs
Position
11:complement(join(1426797..1427669,1428699..1428734,1428833..1428972,1430207..1430363,1430474..1430647,1430769..1431016,1433540..1433675))
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AA seq
587 aa
AA seq
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MADTKADAKAEAKAETIGGGGSGSFSEQAFVEKLNKLNNTATRIQTLSNWCIFHRKRARK
VVDTWEKQYNSANKDKKVSFLYLSNDILQNSKRKGGEFVNEFWRVLPGLLKDFYVNGGED
GKKVVGRLIDIWDERKVFGTRIESLKDDILGGSTHTMGNNGNSSNPSSHPSSVSKAVRKD
SGTVTKKLTIGGMPEKIVTAYQSVLDQHFDEDTALNKCNNAVSVLERMDKDVDDACTQGI
QQGSSLISDLQGQETVLKQCIEQLESVNMARITLINKLREALSEQEAKSELLRNQLHVAR
AKAEHAMQLKQRLGSALNNGAGSSSSPLMVTLPPGQTAAMMQNSAAMPIFPHYQPLHPAT
SLPATSSAVGDEPKKTAAAMADKLASLSAPEKVLSSIFSSLAAEQARNSGSTSGDLSAGP
PGFESNKKPRLDNPIHVSDMGAPPFFGQVPQVQPQIGATAALGGTQPPTQANQATGSFPP
PPPPLPLMPQFVQNTGGMFGMGPFGMVSGSAPPPPLLPNIMSAGFPRLSAPPPLPLPTQP
QNQSQPQQQQSPQAPQQSPTSTGFFQPPGAGFFPPVQVQQSPSAQRQ
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccaaggcggacgccaaggcggaggcaaaggcggaaactatcggcggcggc
ggctctggctcgttcagcgagcaagcgtttgttgagaagcttaacaagctcaacaacacg
gcgactaggatccagacactttcaaattggtgcatttttcaccgaaagagagccagaaag
gttgttgatacatgggagaagcagtataacagtgcaaataaggataagaaagtatcattc
ctgtacctgtcaaatgatatcctgcaaaatagtaaacgcaagggaggggagtttgtgaat
gaattctggagggttcttcctggattattgaaagacttttatgtcaatgggggagaagat
ggaaagaaagtagtcggaagattaatagatatttgggatgaacggaaggtctttggaacc
cgtattgaaagtctgaaagatgacattcttggtggtagcactcatacaatgggtaacaat
ggcaatagctcaaatccaagctctcacccctcttcagtttccaaagctgtgcgaaaagat
tctggtacagtaacaaaaaaacttactattggcgggatgccagaaaagattgtaacagca
tatcagtctgtgcttgatcaacattttgacgaagacacagctttaaacaaatgcaataat
gctgttagtgttttggaaaggatggataaagatgtagatgatgcttgtacccaaggtatt
cagcaaggatcatcgttgatttctgaccttcaagggcaggaaacagtccttaagcagtgc
attgagcaacttgaaagtgtcaacatggctagaataaccctaatcaataaactaagagaa
gccctcagcgaacaggaagcaaagtcagagcttcttcgcaatcagttgcatgtagctcga
gcaaaggctgaacatgccatgcaactaaaacaacgacttggtagtgccttgaacaatggt
gcaggatctagttctagtccactgatggttacacttccaccaggacaaacagctgccatg
atgcagaattcagctgcaatgccaatatttccccactatcaaccactgcatccagcaacc
tcacttcctgccacatctagtgctgttggtgatgagcccaaaaaaactgcagcagctatg
gcagataagcttgcatctttgtcagctcctgagaaggtgctctcctccattttctcgtcc
cttgctgctgaacaagcaaggaatagtggttcgacttctggagatctctctgcaggacct
ccaggctttgagagcaataagaagcctaggcttgacaaccctattcatgtgagtgacatg
ggtgctcccccattctttgggcaagtaccacaggtgcaaccacagattggagcaacagct
gctcttggaggcacacagccaccaacacaagcaaaccaagcaaccggttcatttccacca
cctccacctccattaccacttatgccacaatttgttcaaaatactggaggaatgtttgga
atgggaccttttgggatggtgagtggctctgcgccgcctccacccctattgcccaacatt
atgtcagcaggttttccaagactaagcgcgcctccacctctgcctctgcctacacaacct
cagaaccagagtcagccccagcagcagcagtctccgcaggcaccacagcaatcgccgacc
tcgacaggattttttcaaccaccaggtgctggcttcttcccaccagtgcaggttcagcaa
tctccatctgcccaacggcaatga
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