Oryza sativa japonica (Japanese rice) (RefSeq): 4349683
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Entry
4349683 CDS
T01015
Name
(RefSeq) alpha-L-arabinofuranosidase 1 isoform X1
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00520
Amino sugar and nucleotide sugar metabolism
osa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
4349683
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
4349683
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Gene cluster
GFIT
Motif
Pfam:
Alpha-L-AF_C
Motif
Other DBs
NCBI-GeneID:
4349683
NCBI-ProteinID:
XP_015617519
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Position
11:1453571..1460005
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AA seq
687 aa
AA seq
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MASRESFMSTIFFFLLLFSLGCKCIASELHLHATQTAVLKVDASPQLARQIPDTLFGIFF
EEINHAGAGGIWAELVSNRGFEAGGPHTPSNIDPWSIIGDDSSIFVATDRTSCFSRNTVA
LRMEVLCDNCPAGGVGIYNPGFWGMNIEDGKIYNLVMYVKSPETVELTVSLTSSDGSQNL
ASTTIPLVPFLSILGQENKDVCPFPLVLKGLYCCRVSGASNWTKLEQKLVAQGTNRTSRL
QITTNKKGVVWFDQVSLMPADTYKGHGFRTELISMMLDLKPRFLRFPGGCFVEGEWLRNA
FRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFLQLSEDLGAAPIWVFNNGISHNDEVD
TAAIAPFVKDVLDSLEFARGNADSTWGSVRAAMGHPEPFPVKYVAIGNEDCGKKFYRGNY
LKFYNAIREAYPDIQMISNCDASSSPLDHPADLYDFHVYTDSKTLFSMKNTFDRSSRNGP
KAFVSEYAVWRSDAGRGSLLASLAEAAFLTGLEKNSDVVQMASYAPLFVNNNDQTWNPDA
IVFNSWQQYGTPSYWMQTLFGESSGAMFHPVTITSSYSGSLAASAITWQDSENSFLRVKI
INFGSDPVSLTISATGLQARVNALGSTATVLTSSNVMDENSFSNPNKVVPVKSQLSNAAE
QMQVTLAPHSFSSFDLALAQSKLVAEM
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagagaatccttcatgagtaccattttcttcttcttgcttctgttctccctc
ggctgcaagtgtatagcttcagagttacacttacatgcgacccagactgcggtcctcaag
gttgatgcctcaccgcaacttgctcgacagatccctgacacactatttggaatatttttt
gaggaaatcaaccatgcaggggctggtggaatatgggctgaacttgttagtaacagaggt
tttgaagctggaggccctcataccccatcaaacattgatccatggtccataattggtgat
gactcttccatatttgtggcgactgatcgaacgtcatgttttagtcggaatactgttgct
ctaaggatggaggttctctgtgataattgcccagctggtggtgttggcatttataaccca
gggttctggggcatgaacatagaagatggaaagatctacaatttagtgatgtatgttaaa
tcaccagaaactgtggagttgacagtttccttaacaagttctgatgggtcgcaaaatttg
gcttcaactaccataccgttagtgccttttctctcaatactgggacaggagaacaaggat
gtttgcccattcccattagttttgaaaggattatattgttgcagggtttctggtgcatcg
aattggacaaaactggagcagaagttggttgctcaaggaacaaatagaacctcaaggctt
caaataacaactaacaagaagggagttgtatggtttgatcaagtatcgctcatgcctgca
gacacttacaagggacatggttttcgcacagaacttatatctatgatgttggacttaaaa
ccacgattcttgagattccctggaggttgctttgtggagggggaatggttaaggaacgca
ttcaggtggagggaatctattggtccatgggaagagaggcctggacactttggggatgtt
tggcattactggactgatgatggccttggatattatgaatttctccagctttctgaggat
ctgggtgctgccccaatctgggtgttcaacaatggaatcagccataatgatgaagttgat
actgctgcgattgctccttttgtaaaagacgtattggacagtctagaatttgcaaggggg
aatgcagattcaacatggggttctgttagagctgcaatggggcaccccgaaccattccct
gtcaaatacgtcgcaattggaaatgaagattgtgggaaaaaattttaccgcggtaattac
ctcaagttttataatgctataagggaggcctatccagacattcaaatgatttcaaattgt
gatgcttcatcaagtccacttgaccatcctgctgatttatatgatttccatgtctatact
gattctaagactttgttttcaatgaagaatacatttgatagatcatctcgtaatgggccc
aaggcttttgtcagtgaatatgctgtttggagaagtgatgcaggtagaggaagtctactt
gcttcattggcagaggcagctttccttactggactggagaagaatagtgatgttgttcag
atggcaagttatgcaccactcttcgtgaacaacaatgatcaaacgtggaacccagacgcc
attgtatttaactcctggcaacaatatggaactcctagttactggatgcagactcttttc
ggtgaatctagcggtgctatgtttcatccagttacaatcacttccagctactctggttct
ctggcagcatctgcaattacttggcaggattctgaaaatagcttcttaagagtaaagatt
ataaactttgggtctgatccagtgagcctcacgatctctgcaactgggcttcaggcccgt
gttaatgcactgggatcaactgccactgttctcacatccagtaatgtgatggatgagaac
tcttttagtaacccgaataaggttgttcctgtcaaaagccagctttccaatgcagcagag
cagatgcaagtcacgcttgctcctcactctttctcctcattcgatcttgcgcttgcccag
tccaaactcgtggcagagatgtga
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