Oryza sativa japonica (Japanese rice) (RefSeq): 4349816
Help
Entry
4349816 CDS
T01015
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4349816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4349816
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
4349816
mRNA degradation factors
5'-3' decay
Decapping complex
4349816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
4349816
NCBI-ProteinID:
XP_015617840
UniProt:
Q2RAE7
Q53QH1
LinkDB
All DBs
Position
11:2565157..2568501
Genome browser
AA seq
380 aa
AA seq
DB search
MPPPPPPQPQPTTTATTSANGGKVTPNLTMDAEGTRLLNLTVLQRLDPAVEDILITAAHV
TLYDFNIDLNQWSRKDVEGSLFVVKRNTQPRFQFIVMNRRNTDNLVEDLLSDFEYELQPP
YLLYRNAAQEVNGIWFYNQHDCEAVASLFGRILNAYAKVPPKPKVPSTKSEFEELEAVPT
SAAIDGPLEPSPATTTIVSDAPDESLVNYFSSAASIGSVSNAPMAGRAHPSSESVATPHV
PLIIPSATPTHQIPPPLVGSSAPPLPLHDTNVHTARSANLVTPAFFTPPSSSSTSMVPPA
SSMMPTAPPLHPTSASAQRATYGTPLLQPFPPPTPPPSLTPSYNEGPIISRDKVKEALLR
LVQNDQFIDLVYRELQNAHM
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgccgccgccgccgcagccgcagccgacgacgacagcgacgacgtcggcgaac
ggggggaaggtgaccccgaacctgacgatggacgccgagggcacgcggctgctcaacctc
accgtgctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccacgtc
accctctacgacttcaacatcgacctcaaccagtggagtcggaaagatgtggaggggtcg
ctgttcgttgtgaagaggaatactcagccgaggttccagttcatcgttatgaacaggcgt
aacacggataatctggtggaggatctattgagtgattttgaatatgaacttcaacctccg
tatttgttgtaccgcaatgctgcccaagaagtaaatggtatctggttctacaatcaacat
gactgcgaagctgttgcaagtctttttggaagaatactgaacgcatatgccaaagtgcct
ccaaaaccaaaagtgccttccacgaaaagtgagttcgaggaattggaggctgtgcctaca
tctgcagccatagatggtccccttgaaccttcgccagcgaccaccactatagtttctgat
gctcctgatgaatccctggttaattacttcagtagtgctgctagcattggcagtgtctca
aatgctccaatggctggaagggcgcatccatcctctgagagtgttgcaactccccatgtg
cccttgatcattccatctgctactccgacacatcaaataccccctcctttagtcggctca
tcagctccgccactgcccctccatgatactaatgtccacactgcccgttcagcaaatctt
gtaacaccagcattttttacgcctccgtcatcctcttctacatcaatggtgcctccagct
tcatccatgatgccaacagcaccacctcttcacccaacttctgcatctgctcaacgagca
acatatggaacccccctactccaaccttttccaccgccaactccacctccatctcttacc
ccttcatacaatgaggggcctattatttcacgggataaagttaaggaagccctcctgaga
cttgttcagaatgaccagttcatcgatttagtctatcgggagttgcagaatgcacatatg
tag
DBGET
integrated database retrieval system
