Oryza sativa japonica (Japanese rice): 4349878
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Entry
4349878 CDS
T01015
Name
(RefSeq) 60S ribosomal protein L3-like
KO
K02925
large subunit ribosomal protein L3e
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4349878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4349878
Ribosome [BR:
osa03011
]
Ribosomal proteins
Eukaryotes
Large subunit
4349878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L3
Motif
Other DBs
NCBI-GeneID:
4349878
NCBI-ProteinID:
NP_001364310
LinkDB
All DBs
Position
11:join(3342392..3342476,3343162..3343272,3343554..3343858,3343981..3344390,3344517..3344775)
Genome browser
AA seq
389 aa
AA seq
DB search
MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVNKPCHLTSFVGYKAGMTHIVREV
EKPGSKLHKKETCEAVTIIETPPIVVVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK
NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASVVRVIVHTQIRKMKGLKQKKAH
LMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACT
EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL
KFIDTSSKFGHGRFQTTDEKQRFFGKLKA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacaggaagttcgagcacccgaggcacggatccctcggcttcctcccgaggaag
cgctcctcccgccaccgcggcaaggtgaagtcattccccaaggatgacgtcaacaaacca
tgccacctcacctcctttgtcggttacaaggctggaatgacccacattgtgcgtgaggtc
gagaagcctggttccaaactccacaagaaggagacctgtgaggctgttaccattattgag
acacctcctattgtcgttgttggacttgtggcctatgtgaagactccacgtggcttacgc
agtctcaactctgtctgggctcagcatcttagtgaagaagtaaggagaaggttctacaag
aactggtgcaagagcaagaagaaggctttcaccaagtatgctctcaagtatgatagcgat
gccggcaagaaggaaatccaaatgcagcttgagaagatgaagaagtatgcttctgttgtc
cgtgtgatcgtgcacactcagattaggaaaatgaagggcttgaagcagaagaaggctcac
ctcatggagatccagatcaatggtggtaccattgccgataaggtggactatggatacaag
ttctttgagaaggagatcccagttgatgctgtgttccagaaggacgagatgattgacatc
attggtgtcaccaagggtaagggttatgaaggtgttgtcacgcgttggggtgtcactcgc
cttccccgcaagacccacaggggtctccgcaaggtcgcctgtatcggtgcctggcatcct
gctagggtttcctatactgttgctcgcgctggtcagaatgggtaccaccaccgcactgag
atgaataagaaggtttacaagatcggcaagtctggccaggaaagccatgctgcctgcact
gaatttgacaggactgagaaggacatcactcccatgggtggcttccctcactacggtgtt
gtgaagggcgactacctcatgatcaagggttgctgtgttggccccaagaagagggtcgtc
accctccgccagtccctgctcaagcagacctctcgtttggcgctcgaggagatcaagctc
aagttcatcgacacctcgtccaagttcgggcacggtcgcttccagaccaccgacgagaaa
cagaggttcttcggcaagctcaaggcttag
Oryza sativa japonica (Japanese rice): 4351604
Help
Entry
4351604 CDS
T01015
Symbol
RPL3, RPL3A
Name
(RefSeq) large ribosomal subunit protein uL3
KO
K02925
large subunit ribosomal protein L3e
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
4351604 (RPL3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
osa03011
]
4351604 (RPL3)
Ribosome [BR:
osa03011
]
Ribosomal proteins
Eukaryotes
Large subunit
4351604 (RPL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L3
Motif
Other DBs
NCBI-GeneID:
4351604
NCBI-ProteinID:
NP_001391969
LinkDB
All DBs
Position
12:join(3457172..3457256,3457862..3457972,3458054..3458358,3458441..3458850,3458943..3459201)
Genome browser
AA seq
389 aa
AA seq
DB search
MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV
EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK
NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAH
LMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACT
EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL
KFIDTSSKFGHGRFQTTDEKQRFFGKLKA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacaggaagttcgagcacccgaggcatggatccctcggcttcctcccgaggaag
cgctcctcccgccaccgcggcaaggtgaagtccttccccaaggatgacgtatcaaagccc
tgccaccttacttccttcgttggctacaaggctggaatgacacacattgtgcgtgaggtc
gagaagcctggctccaagctccacaagaaggaaacctgcgaggctgttaccatcatcgag
acccctccgcttgtcattgttggactcgtggcctatgtcaagacacctcgtggacttcgc
tctctcaactctgtctgggcccagcaccttagcgaggaggtgcggagaaggttctacaag
aactggtgcaaaagcaagaagaaggctttcactaagtatgcccttaagtatgacagtgat
gctggcaagaaagaaatccagatgcaacttgagaagatgaagaagtacgcatctattgtt
cgtgttattgcccacactcagatcagaaagatgaagggcttgaagcagaagaaggctcac
ctcatggagatccagatcaacggtggcactatcgccgacaaggtggactatggctacaag
ttctttgagaaggaaatccctgttgatgcagtcttccagaaggacgagatgattgacatc
attggtgtcactaagggtaagggttatgaaggtgtcgtcactcgttggggtgtcacccgc
cttcctcgcaagacccacaggggtctccgcaaggttgcttgtattggtgcctggcatcca
gccagggtgtcctacactgttgcccgtgctggtcagaacggataccaccaccgcactgag
atgaacaagaaggtttacaagattggcaagtctggtcaggagtctcatgcggcctgcacc
gagttcgacaggactgagaaggacatcaccccgatgggcggcttcccgcactacggtgtg
gtgaagggcgactacctcatgatcaagggttgctgcgtcggtccgaagaagagagtcgtc
accctccgccagtcgctgctgaagcagacctcgcggctcgccctggaggagatcaagctc
aagttcatcgacacctcgtccaagttcgggcacggtcgcttccagaccaccgacgagaag
cagaggttcttcggcaagctcaaggcctag
DBGET
integrated database retrieval system
