Oryza sativa japonica (Japanese rice): 4349922
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Entry
4349922 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K24741
WD repeat-containing protein 20
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
osa04990
]
4349922
Domain-containing proteins not elsewhere classified [BR:
osa04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
4349922
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_Prp19
EIF3I
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_Nup120_160
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Cytochrom_D1
Beta-prop_Vps41
Ge1_WD40
SR-25
RMC1_N
Motif
Other DBs
NCBI-GeneID:
4349922
NCBI-ProteinID:
XP_015616616
UniProt:
Q0IU88
Q53PI1
LinkDB
All DBs
Position
11:join(3838338..3838607,3838694..3838805,3838906..3838987,3839125..3839212,3839311..3839394,3840056..3840152,3840252..3840339,3840769..3840874,3840972..3841166,3841641..3842087)
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AA seq
522 aa
AA seq
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MTVAYLKEMPSTPSIPSCTSGMRSVAARLLGAGTGTRPLSFVGSNGVGGRSASGSCHAGQ
SRALVNYDDDRGTYIIFNIADSLFIRDLNYRRPVKRICFSDMKPLCHAFDSEAKDGHDLI
VGFLSGEVYSMSLRQQLKEPGPEPIALQHFFNTNSRCTGVAWVPGHEGFFVVSNADGNLF
VYDKSKDVNTDWTFPTVEDQSEMKISYAKSSKSNPVARWHICQGAINAISFSPDGTYLAT
IGRDGYLRVFDFAKEQLIFGGKSYFGALLCCSWSTDGKYLLSGGEDDLVQVWSMHDRKMV
AWGEGHKSWVSAVAFDSYWSPPKPYERKQNSMHRFASPKSDEAEEDPIYSFASPKSDETK
ENTNIMYRFASIGQDAQLLLWDLTKDELNVSLTHASSCSESSSSGSCSASSSSGSSSTED
RDKEFPLGFLHPSPRLQEVPKLSPEVAHLVGVEPLFTLEFTSESVITVCRRGRITTRPRE
EIDNETETDQQHPGSSKLVIGNGTGNYSNPSRGCSLVCSKTI
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggcatatctgaaggagatgccgtccacaccatcaataccaagctgtacgagt
gggatgcgatccgtagccgctcggttgctcggtgctgggactggaacccgtccactcagc
tttgtggggagcaatggtgtcggtggccggtctgcctcggggagctgccatgccggtcaa
tcgcgagctttggtgaactatgatgatgacaggggcacctacatcatcttcaacattgcc
gactcactgttcatcagagatctcaactatcgtcgtccggtaaagcgcatttgcttcagt
gatatgaaaccactttgtcatgcatttgactcggaggccaaggatggacatgaccttatc
gttgggttcttgtcaggagaagtctattcaatgtcattgaggcagcagttgaaggaacct
ggtcctgagcccattgcacttcaacacttcttcaacaccaacagccggtgtactggtgtt
gcatgggtacctgggcatgaaggattttttgttgtcagcaatgctgatggaaatttgttt
gtgtatgacaaatccaaggatgtaaatactgattggacatttccaactgtagaggatcaa
agtgagatgaagatttcatatgcaaagtctagtaagagcaatccagttgcaagatggcac
atctgtcaaggtgcaatcaatgccatttccttttcgccagatggaacttacttggcaacc
attggacgagacggttatttacgagtgtttgactttgcaaaggagcaactaatatttggt
gggaaaagttattttggggctctattgtgttgctcttggagcacggatggtaaatatcta
ttatcaggcggtgaagatgatcttgtgcaagtgtggagcatgcatgacagaaagatggtt
gcatggggagaggggcataagtcatgggttagcgcagttgcatttgattcgtactggtcc
ccaccaaaaccgtatgaaagaaaacaaaatagcatgcatcgcttcgcttcaccaaaatcg
gatgaagcagaagaagatcccatatattccttcgcttcaccaaaatcagatgaaacaaaa
gaaaataccaatatcatgtatcgcttcgcttctattggtcaggatgcccagctgcttctc
tgggatctaactaaggatgagcttaatgtgtcactaacccatgcttccagctgctcagaa
tcatctagcagtggaagctgctcagcgtcatctagcagtggaagctcttctacagaagac
agggacaaagaattcccccttggcttccttcacccttctccacggctgcaagaagtacca
aagctctcacctgaggttgctcatctggtcggcgtggaacccctcttcacactggaattc
accagcgaatcggttatcaccgtatgtcgcagggggcgaatcaccaccaggccaagagaa
gaaatcgacaatgaaactgaaaccgaccagcagcatcctggttcttccaagctggtcata
ggcaatggcacgggaaactattctaatccttcgaggggatgttccctcgtttgctcaaaa
accatctaa
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