Oryza sativa japonica (Japanese rice): 4350176
Help
Entry
4350176 CDS
T01015
Name
(RefSeq) chlorophyll A-b binding protein CP26, chloroplastic
KO
K08916
light-harvesting complex II chlorophyll a/b binding protein 5
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00196
Photosynthesis - antenna proteins
osa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
4350176
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
osa00194
]
4350176
Photosynthesis proteins [BR:
osa00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
4350176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chloroa_b-bind
Motif
Other DBs
NCBI-GeneID:
4350176
NCBI-ProteinID:
XP_015617156
UniProt:
Q53N83
A3CA44
A0A1L2JKK6
LinkDB
All DBs
Position
11:join(8092722..8092920,8093033..8093117,8093662..8093712,8093813..8093933,8094041..8094175,8094608..8094868)
Genome browser
AA seq
283 aa
AA seq
DB search
MAALAPSKMLGTRLNFAGSSRYATAAPTTGAQKIVSLFSKKPAPKPKPAAVTSSSPDIGD
ELAKWYGPDRRIFLPEGLLDRSEVPDYLNGEVPGDYGYDPFGLSKKPEDFSKYQAYELIH
ARWAMLGAAGFIIPEACNKFGANCGPEAVWFKTGALLLDGNTLNYFGNSIPINLIVAVAA
EVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLASDPDQAALLKVKEIKNGRLAMFSML
GFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVISGAAERTPSL
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctcgccccgtccaagatgctcggcacccggctcaacttcgccggctcctcc
cgctacgccaccgcggcaccgaccaccggagcgcagaagatcgtctccctcttcagcaag
aagcccgccccgaagcccaagcccgccgccgtcacctcctcgagccccgacatcggcgat
gagctcgccaagtggtacggccctgacaggaggatcttcttgccggagggtctcctggac
cgctcagaggtgccggactacctcaacggagaggtccccggagactacggctacgaccct
tttggcctcagcaagaagccagaggacttctccaagtaccaggcctatgagctgatccat
gccaggtgggcgatgctcggcgccgctgggttcatcatccccgaggcctgcaacaagttt
ggcgcaaactgcggccccgaggccgtctggttcaagaccggcgccctcctcctggacggc
aacaccctcaactacttcggcaacagcatccccatcaacctcatcgtcgccgtcgccgcc
gaggtcgtcctcgtcggcggcgccgagtactaccggatcatcaacggcctggatctggag
gacaagctccacccaggtggcccattcgacccgctggggctggcgagcgacccggaccag
gcggcgctgctgaaggtgaaggagatcaagaacgggcggctggccatgttctccatgctg
gggttcttcatccaggcctacgtcaccggcgagggccccgtcgagaacctctccaagcac
ctcagcgaccccttcggcaacaacctgctcaccgtcatctccggcgccgccgagaggacg
cccagcctgtaa
DBGET
integrated database retrieval system
