Oryza sativa japonica (Japanese rice): 4350355
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Entry
4350355 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K12586
exosome complex component RRP43
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4350355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4350355
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
4350355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
4350355
NCBI-ProteinID:
XP_015615395
UniProt:
B7ELW5
A0A8J8XTE4
LinkDB
All DBs
Position
11:join(12462131..12462349,12462465..12462534,12462637..12462742,12463288..12463354,12466806..12466881,12468380..12468669,12469222..12469314)
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AA seq
306 aa
AA seq
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MAAEAQATAAGGLAGEMEVEAYRRLFPLAFLERHLRESVRPDARRPAEARPTTVALAAVS
SAHGSALVRLGDTAMLASIKLEVMSPSGEAPDEGSIAVEFHMPPICSPLVRPGRPAEVAP
VISKNLEDILMSSGMLNLKELCLISGKASWLAYLDVYCLNADGSLFDAALISAVAAFTHL
EIPLVSVGDDGRVFTVGGNEGKAKYELVNREKRKLTITNVPFSLTCALHKDNVLADPTAE
EESIIETSVTIVLDSSDQIVSIQKPGGAVTSMTTIKECISLAKDRRRKLREILMDNVEAM
EVDQTD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggcccaagccacggcggccggcggcctcgccggcgagatggaggtggag
gcgtaccgccgcctcttccccctcgccttcctcgagcgccacctccgcgaatccgtccgc
cccgacgcgcgccgccccgccgaggcccgcccaaccaccgtcgccctcgccgccgtgtcc
tccgcccacggctccgccctcgtccgcctcggcgacaccgccatgctcgcgtcgatcaag
ctcgaggtgatgtcgccctccggtgaggcccccgacgaaggatctattgctgtggagttc
cacatgccgcctatctgttccccgcttgtcagaccaggacggccggcagaggtggcgcca
gtcatctccaagaacctagaggacattctcatgagctcagggatgctaaatttgaaggag
ctctgtttgatcagtgggaaggcatcttggttagcatacctggatgtctattgtttgaat
gctgatgggtctctattcgacgctgcactaatctcagctgttgctgcatttacacatttg
gaaattcctttggtatctgtcggtgatgatggtagagtatttactgttgggggcaatgaa
ggcaaagccaaatatgaattggtaaacagagaaaagaggaagcttacgattactaatgtt
ccattttcccttacatgtgcacttcacaaggataatgttctagcggatccaactgctgaa
gaagaatcaataatagagacttctgtgactattgttctcgattcttcagaccagatagtg
tcaatacaaaaacctggaggtgcagtgacatctatgacaactattaaggaatgcattagc
ttggctaaggacaggagaagaaagttaagagaaattctcatggacaatgttgaagcaatg
gaagtcgaccaaactgattaa
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