KEGG   Oryza sativa japonica (Japanese rice): 4350517
Entry
4350517           CDS       T01015                                 
Name
(RefSeq) protein transport protein SEC24 B isoform X1
  KO
K14007  protein transport protein SEC24
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4350517
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4350517
Membrane trafficking [BR:osa04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    4350517
SSDB
Motif
Pfam: Sec23_trunk Sec23_BS Sec23_helical zf-Sec23_Sec24 Gelsolin
Other DBs
NCBI-GeneID: 4350517
NCBI-ProteinID: XP_066161753
LinkDB
Position
11:join(18843802..18844608,18845199..18845429,18845525..18845599,18845686..18845784,18846948..18847059,18847524..18847651,18847783..18847854,18847960..18848079,18848905..18848985,18849398..18849475,18849554..18849646,18849818..18849872,18850733..18850809,18850946..18851017,18851097..18851180,18851651..18851770,18851855..18851923,18852752..18852829,18853715..18853853,18854021..18854185,18854270..18854415,18854532..18854711,18854865..18854953,18855028..18855059,18855151..18855257)
AA seq 1102 aa
MSSSSPYSPPQQQQPRPPQPFAAAPAQNPTTTTTLPGAFSNLQIARGPAPPPGAPRGLAP
QPAGFAARPSFPGSPPAAGPPFARAPVASSAHASPPFGGPPAAAAAQPRAFGGPPGMVSQ
APPPFGGPPAAAASQAPPLQFNAPPGAMSHQPPPPQFGGPPGAMSQPAPPQFGAPGGMPQ
PAPPQFGAPRPAFSGPPAAAGLASSQAMPPSFGSQQQQPFGGAPQFGLPRPGAQPPFPAQ
SAPLSQQAPFMGPPRGSAPAFGAAPWQSQGAGSGAMQPPMRMPGMPPNTLGQGMPPTMPT
MPYSPHAGTQVSTPSKIDPNQIPRPMAETSVIIFETRQGGQAAIPPAASSEFIVKDTGNC
SPRLMRCTVNQIPCTGDLLTTSGMPLSLMVQPFSLPHPSEEPIQLVDFGDMGPIRCSRCK
AYINPFMRFVDQGRRFICNLCGFSNDTPREYICNLGPDGRRRDADDRPELCRGTVEFVAS
KEFLPRSHSVHLNKTSILMDLQPVGPQKVRDPMPAVYFFLIDVSMNAIQTGSTAAACSAI
SQAISDLPEGPRTMVGIATFDSAIHFYSLKRAQQQPLMLIVPDVQDVYTPLQKDLILPVS
ECRENLEQLLESIPSMFENNRVADSAFGAAMKAGFLAMKSTGGKLLVFQSVLPSLGVGSL
SAREAEGRANVSTGDKEPHKLLQPVDKTLKTMALEFAEYQVCVDVFLTTQSYVDIASISV
VPNTTGGRVYYYYPFSARSDPAKLFNDLRWNISRPQGFEAVMRVRCSQGLQVQDYFGNFC
KRVPTDIDLPSIDSDKTIMVTFKHDDKLQENSECGFQCALLYTTVYGQRRIRVMNLSLPC
TNMLSNLFRYADLETQFTCFLKQAANGIPTSTLLHLREEVTNTCINILQSYRKYCASVSS
SGQLILPEALKLLPLYTLALIKSIGLRNEGRLDDRSYWISLVSSVSVLLAVPLVFPRLIP
IHDLTSRGDDESLIPSPLMLNSENIREDGVYLLENGEDGLIYVGNVVEPTILEQIFGVSS
LAALPSQAVLEQFDNELSRKVNEVINEIRRQRCSYLRLRLCRRGEPSGDFFRSFLTEDKA
PGGLSYVEFLVHVHRQIQSKMT
NT seq 3309 nt   +upstreamnt  +downstreamnt
atgtcgtcgtcgtcgccgtattcgccgccgcagcagcagcagccgcggccaccgcagccg
ttcgccgccgcgccggcgcaaaaccctaccaccaccaccaccctacccggggccttctcc
aacctccagatcgcccgcggccccgcgcctcccccgggcgctccccgcggcctcgcgccg
cagccggccgggttcgccgcgcggccctccttccccggtagcccgcccgccgccggcccg
ccgttcgcgcgcgcgccagttgcttcctctgcgcacgcctcgccgccgttcggtgggcct
cccgcggcggcggcggcgcagccacgtgcgttcggtgggccgcccgggatggtctcgcag
gcgccgcctccgttcggggggcctccggcggcggcggcgtcgcaggcgccgccgctgcag
ttcaacgccccacctggggcgatgtcccaccagcctcctccgccccaattcggggggcct
cctggggcgatgtcccagccagcgccgccgcagttcggtgctcctggggggatgcctcag
ccggcgccgccgcagtttggtgcgccgcggccggcattctccgggccgcctgcggcagca
ggtctagcgtcgtcccaagctatgccgccgagtttcgggtctcaacagcagcagccgttc
ggtggggcgccccagtttgggcttccgcgtcccggtgcgcagccaccctttcctgcacaa
tcggcgccactgtcgcagcaggcgccgttcatgggaccgccgaggggtagcgcccctgcg
tttggagctgcgccgtggcagtctcagggagctgggtctggtgctatgcaaccaccgatg
agaatgcctggcatgccgccaaacacacttggccaagggatgcctcctaccatgcccaca
atgccatattctccccatgctggaacccaggtctcaaccccatccaagattgatcctaat
caaattccacggccaatggcagaaacatcagtcataatttttgagacccgtcaaggtggt
caagcagctattcccccggctgcatcgagtgaatttatcgtgaaggacactgggaactgt
agtccccgtttgatgcggtgtactgtcaatcagataccttgtacaggggacctcttgaca
acatcaggcatgcctttatctctaatggttcagccgttttctcttcctcacccatctgag
gaacctattcagcttgtagacttcggtgacatgggacctattcggtgttcccgttgcaaa
gcatacataaatcctttcatgagatttgttgatcaaggaaggcgctttatctgtaattta
tgtggatttagcaatgatactcctagggagtacatatgcaacttagggcctgatggtagg
cgccgtgatgctgatgacagacctgagctatgcaggggaaccgttgaatttgtcgcttcc
aaggaatttctgccgagaagccattcagttcacctgaacaaaacaagtatattaatggat
cttcaacctgtagggccacaaaaagttcgcgacccgatgcctgctgtatatttctttctt
attgatgtctccatgaatgctatacaaacaggttcaactgctgcagcttgcagtgcgatt
tcccaggctatttcagatctgccggaaggtcctcgaacaatggttggaattgccacattt
gattccgctattcacttttacagccttaagcgtgctcagcagcagcctttgatgctcatt
gttcctgatgtgcaagatgtatatacacctctacaaaaggatttgattcttccagtttct
gagtgccgtgagaatctggagcagctgctggaaagcatccctagcatgtttgagaataac
agagttgctgattctgcttttggagcagctatgaaggctggcttcctggctatgaaatca
actggtggaaagctacttgtttttcaatcagtgcttccatcacttggtgttggttcttta
tctgctagggaagctgaaggtagagcaaatgtttccactggtgacaaggaaccccacaag
cttttgcagccagttgacaaaactctcaagacgatggcactagaatttgctgaatatcag
gtctgcgtggatgtgttccttactacacaatcatatgttgatattgcttcgatatctgtt
gttcccaatactacaggaggccgggtttactactactatccgttttccgctcgttcggat
ccggccaagctattcaacgaccttagatggaatatcagtagacctcagggtttcgaggct
gttatgcgtgtcagatgcagccaggggctccaagttcaggactattttggcaatttctgc
aagcgtgttcctactgacattgatcttccatcgattgattctgacaaaactataatggtc
acctttaagcacgatgacaagttacaggaaaattcagaatgtggtttccagtgcgctctt
ctctacactactgtatatggacaaagaaggattcgagttatgaacctctcactcccatgc
acaaacatgctcagtaatctcttccgatatgctgatttggaaacacagtttacatgcttc
ctgaaacaagctgctaatggcattccaacatctacgctactccatcttcgggaggaagta
acaaatacatgtataaatattctccagtcctaccgtaaatattgtgcatctgtaagctca
tctgggcagttgatccttccagaggcactcaaactcctgcccttgtacactttagcgctt
atcaaaagcataggcttgcgaaatgaggggcggttggatgatcgttcatattggatatcc
ctcgtctcctcagtttctgttctattagctgttccattggtgttccctagattgattccg
attcatgatctcacatcaaggggagacgatgaatcacttattcctagtccccttatgctc
aatagtgaaaatatacgtgaagatggagtctatttattggaaaatggtgaggatggtcta
atttatgtaggaaatgtggtagagccgaccatcctcgaacaaatatttggtgtgtcttct
ttggctgcattaccaagtcaggctgtgttggagcaatttgacaatgaactgtcacggaag
gtaaatgaagtaattaatgaaataagacgccagagatgttcttatttaaggttgcgtcta
tgcagaaggggtgaaccatctggtgatttcttccgctcatttttgacagaggacaaggca
cctggtggcctttcctatgtggagttccttgtgcatgtgcacaggcaaatccagagcaag
atgacgtga

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