Oryza sativa japonica (Japanese rice): 4350590
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Entry
4350590 CDS
T01015
Name
(RefSeq) transport inhibitor response 1-like protein Os11g0515500
KO
K27740
protein auxin signaling F-box 2/3
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
4350590
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Motif
Pfam:
F-box_5
Transp_inhibit
F-box-like
LRR_At5g56370
F-box
Motif
Other DBs
NCBI-GeneID:
4350590
NCBI-ProteinID:
NP_001410318
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Position
11:complement(join(20428364..20429137,20430197..20430692,20432003..20432439))
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AA seq
568 aa
AA seq
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MVFFPEEVVEHILGFLASHRDRNAVSLVCREWYRVERLSRRSVLVRNCYAARPERVHARF
PGLRSLSVKGRPRFVPAGWGAAARPWVAACVAACPGLEELRLKRMVVTDGCLKLLACSFP
NLKSLVLVGCQGFSTDGLATVATNCRFMKELDLQESLVEDRDSRWLGCFPKPSTLLESLN
FSCLTGEVNSPALEILVARSPNLRSLRLNRSVPLDVLARILCRRPRLVDLCTGSFVRGNI
VGAYAGLFNSFQHCSLLKSLSGFWDATSLFIPVIAPVCKNLTCLNLSSAPMVRSAYLIEF
ICQCKKLQQLWVLDHIGDEGLKIVASSCIQLQELRVFPANANARASTVTEEGLVAISAGC
NKLQSVLYFCQRMTNSALITVAKNCPRFTSFRLCVLDPGSADAVTGQPLDEGYGAIVQSC
KGLRRLCLSGLLTDTVFLYIGMYAERLEMLSVAFAGDTDDGMTYVLNGCKNLKKLEIRDS
PFGDSALLAGMHQYEAMRSLWLSSCNVTLGGCKSLAASMANLNIEVMNRAASINEADNAN
DAKKVKKLYIYRTVAGPRGDAPEFISTF
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcttcccggaggaggtggtggagcacatccttgggtttctagcgtcgcaccgc
gaccgcaacgcggtgtcgctggtgtgccgggagtggtaccgcgtcgagcgcctcagccgc
cgctcggtgctcgtgcgcaactgctacgcggcgcgcccggagcgcgtgcacgcgcgcttc
cccggcctgcgctcgctgagcgtgaaggggaggccgcgctttgtccccgcggggtggggt
gccgcggcgcggccatgggtggccgcgtgcgtcgccgcgtgccctggcctcgaggagctc
cggctgaagcggatggttgtcactgatgggtgcctcaagctgctcgcttgctcattcccc
aatttgaagtcgctcgtccttgttggctgtcaggggttcagcactgatgggcttgctact
gtcgctaccaattgcagatttatgaaggaactggacttacaagagagtctggtggaggat
cgagactctcgttggcttggatgttttcccaagccttctacattactagaatccttgaat
ttttcttgcttgaccggggaggtgaatagtcctgcattggaaatactggttgcaaggagt
ccaaatcttagaagcttgagattgaaccgttcagttccacttgatgttttggccagaatt
ctttgtcgcagacctaggctggtggatttatgtacaggatcttttgtacgaggcaatatt
gttggtgcatatgctgggctattcaatagttttcaacattgcagtttgctgaagagttta
tctgggttttgggatgctacaagcttgtttattccagtgattgctcctgtttgcaagaat
ctaacgtgcttgaaccttagctctgctccaatggtcaggagtgcttatcttattgaattt
atttgtcaatgcaagaaactccaacaattgtgggtgttagatcacattggtgatgaagga
ttgaaaattgtagcctcatcctgtatacagctccaagagttgagagtatttcctgcgaat
gcaaatgccagagcaagcactgtgacagaggaagggctagttgccatatctgcaggctgt
aacaagttacagtctgtgctctatttttgccaacggatgacaaactctgcactgattact
gtcgcaaagaactgcccacgattcacgtccttcagactgtgtgttcttgatccaggatca
gcagacgctgtgacagggcagccattggatgagggttatggggcaatcgtacagtcatgc
aaaggccttagacggctatgtttgtctggacttctcacagacacagtgttcctctacatt
ggcatgtatgctgagaggctggagatgctttctgtagcatttgcaggagataccgacgat
ggcatgacctacgtgctcaatggctgcaaaaatctcaagaagctggaaatcagggacagt
ccttttggtgacagcgcgcttcttgcaggcatgcatcagtacgaggcaatgcgctcactc
tggttgtcgtcgtgtaatgtcaccctggggggttgcaagtctcttgcagcaagcatggca
aacctcaacatcgaggtcatgaatagagcagcaagtatcaatgaggcagacaatgctaat
gatgcaaagaaggtgaagaagttgtatatttacaggacagttgctggaccgaggggtgat
gcgcctgaattcatctcaacgttctaa
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