Oryza sativa japonica (Japanese rice): 4350632
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Entry
4350632 CDS
T01015
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.13
KO
K14487
auxin responsive GH3 gene family
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
4350632
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
4350632
NCBI-ProteinID:
XP_015615787
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Position
11:complement(join(21129596..21130260,21133910..21134715,21134775..21134876,21134969..21135399))
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AA seq
667 aa
AA seq
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MDHLTMTSTSSENAPDHDHDHDASSPAPATATAAALPPMIPACDPHDGPACLELIEVLTT
RAAAVQRRVLAEVLAMNTGTDYLRRFLGDEVVAAAGGEDELAAAFKERVPVVEYEDVKPY
IERIANGAPSSLISSKPITELLTSSGTSGGQPKLMPATEEELDRKTFLYNLLVPVMNKYV
EGLDEGRGMYLLFVKPEITTASGMVARPVLTSYYKSRHFRRRPDSPYTRYTSPDAAILCP
DSRQSMYAQLLCGLARRGEVLRVGAVFASAFLRAVKFLEGHWRALCADIRAGRADPAVVT
DAACRGAVDAVLAARADPDLADAIAAECGGASWRGIVRRLWPRTKYIDVIVTGSMAQYIP
LLEFYGGGLPLVSTMYASSESYFGINLRPLDPPEEVVYTLLPNMCYYEFIKVEKDGDGEK
VRDGEVVDLVGVEVGAYYELVVTTFTGLYRYRVGDILQVAGFHNAAPQFRFVHRRNVVLS
VDTDKTSEDDLLRAVTAAKPLLDPLSCVLAEYTAYADTSSIPGHYVLFWELTPSPSPPPP
PCHDDADDAADIGEDKDKVAHVMAACCAAVEAGLDSVYRRCRSRDRSIGPLEIRVVAPGA
FDALMDMCVSHGSSVNQYKTPRCIKHPDAIAVLEQRVVGRFFSDAVPHWEPLKVDGAAAA
PATGSDQ
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggatcatctaacaatgacgtccacgtcgtctgaaaatgcgcccgaccacgaccacgac
cacgacgcctcttcgccggcgccggcgacggcgacggcggcggcgctgccaccgatgatc
ccggcgtgcgacccgcacgacgggccggcgtgcctggagctcatcgaggtgctgaccacg
cgcgccgccgccgtccagcggcgcgtcctcgccgaggtcctcgccatgaacaccggcacc
gactacctccgccggtttctcggcgacgaggtcgtcgccgccgccggcggcgaggacgag
ctcgccgcggcgttcaaggagcgcgtgccggtggtggagtacgaggacgtgaagccgtac
atcgagcgcatcgccaacggcgccccgtcgtcgctcatctcctccaagcccatcaccgag
ctcctcacgagctccggcacgtcaggcgggcagccgaagctgatgccggcgacggaggag
gagctcgaccgcaagaccttcctctacaacctcctcgtccccgtcatgaacaagtacgtg
gaggggctggacgaggggagggggatgtacctgctgttcgtgaagccggagatcacgacg
gcgtcggggatggtggcgaggccggtgctgacgagctactacaagagccgccacttccgg
cggcggccggacagcccgtacacgcggtacacgagccccgacgcggcgatcctctgcccg
gacagccgccagagcatgtacgcgcagctgctctgcggcctcgcccgccgcggcgaggtg
ctccgcgtcggcgccgtcttcgcctccgccttcctccgcgccgtcaagttcctcgagggc
cactggcgcgccctctgcgccgacatccgcgccggccgcgccgacccggccgtcgtcacc
gacgccgcctgccgcggcgccgtcgacgccgtcctcgccgcccgcgccgaccccgacctc
gccgacgccatcgccgccgagtgtggcggcgcgtcgtggcggggcatcgtgcggcggctg
tggccgcggaccaagtacatcgacgtgatcgtgacggggtccatggcgcagtacatcccg
ctgctggagttctacggcggcgggctgccgctggtgtcgacgatgtacgcgtcgtcggag
tcctacttcggcatcaacctccggccgctggacccgccggaggaggtggtgtacacgctg
ctgcccaacatgtgctactacgagttcatcaaggtggagaaggacggcgacggcgagaag
gtccgcgacggcgaggtggtggacctcgtcggcgtcgaggtcggcgcctactacgagctc
gtcgtcaccaccttcacagggttgtaccggtacagggtgggggacatcctgcaggtggcc
gggtttcacaacgcggcgccgcaattccggttcgtgcaccggcgcaacgtcgtcctcagc
gtcgacaccgacaagacctccgaggacgacctcctccgcgccgtcaccgctgcgaagccc
ctcctcgaccccctctcctgcgtcctcgcggagtacaccgcctacgccgacacctcctcc
atccccggccactacgtcctcttctgggagctcaccccctctccctcgccaccgccgccg
ccatgccatgacgacgccgacgacgcagccgacatcggcgaggacaaggacaaggtggca
cacgtcatggcggcgtgctgcgccgccgtggaggccgggctggactcggtgtaccggcgg
tgcaggagccgggacaggtcgatcgggccgctggagatccgtgtcgtggcgccgggggcg
ttcgacgcgctcatggacatgtgcgtgtcgcacggctcgtcggtgaaccagtacaagacg
ccgcggtgcatcaagcaccccgacgccatcgccgtcctcgagcagcgcgtcgtcggccgc
ttcttcagcgacgccgtcccgcactgggagcccctcaaggtcgacggcgccgccgccgcc
cccgccaccggcagcgaccagtga
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