Oryza sativa japonica (Japanese rice): 4350698
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Entry
4350698 CDS
T01015
Name
(RefSeq) adagio-like protein 3
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
4350698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4350698
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
4350698
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_4
Kelch_3
Kelch_2
Kelch_5
Kelch_1
PAS_9
Kelch_6
PAS
PAS_3
F-box-like
F-box
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
4350698
NCBI-ProteinID:
NP_001410347
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Position
11:complement(join(22115327..22116914,22119567..22119871))
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AA seq
630 aa
AA seq
DB search
MFDAGDRGGGGGVVAVKRMKLCEEEEEEEEGMEVDEEEEEVGWVWRPPGGLAGEDEAAAW
EGRAAAIVVSDAVEVDFPVIYVNAAFEAATGYRADEVLGRNCRFLQFRDPRAQRRHPLVD
PMVVSEIRRCLNEGIEFQGELLNFRKDGAPLYNRLRLIPMHGDDGFVTHVIGIQLFSEAN
IDLSNVSYPVYKQQSNHRPNIQEINPASHEHIPKIQSSEYCCILQLSDEVLAHNILSRLS
PRDVASIGSVCTRMHELTKNDHLRKMVCQNAWGRDVTVRLEMSTKMLGWGRLARELTTLE
AASWRKFTVGGRVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLESAKPEWRRV
KVSASPPGRWGHTLSWLNGSWLVVFGGCGQQGLLNDVFVLDLDAKQPTWREVASEGPPLP
RSWHSSCTLDGSKLVVSGGCTESGVLLSDTFLLDLTKEKPAWKEIPTSWSPPSRLGHTLS
VFGKTKLFMFGGLAKSGSLRLRSCDAYTMDAGEDSPQWRQLATTGFPSIGPPPRLDHVAV
SLPCGRIIIFGGSIAGLHSPSQLFLLDPAEEKPTWRILNVPGQPPKFAWGHSTCVVGGTR
VLVLGGHTGEEWILNELHELCLASRPDEDE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgcgggggatcgcggcggaggcggcggggtggtggcggtgaagaggatgaag
ctgtgcgaggaggaggaggaggaggaggaggggatggaggtggatgaggaggaggaggag
gtggggtgggtgtggaggccgccgggggggctagcgggggaggatgaggcggcggcgtgg
gaggggagggcggcggcgatcgtggtgtcggacgcggtggaggtggatttcccggtcatc
tacgtcaacgccgccttcgaggccgccacggggtaccgcgccgacgaggtcctcggccgc
aactgccgattcttacaattccgggatccacgtgcccaaagacgacatccgcttgttgat
cccatggttgtttcagagatccggcgatgcttgaatgagggaattgagttccaaggtgag
ctattgaattttcggaaggacggtgctccactgtacaacaggctaaggctcattccaatg
catggggatgatggttttgtgactcacgtcattggaatccagttgttctctgaagctaac
attgatcttagcaatgtatcatatccagtgtataaacaacagtccaaccacagacccaac
attcaagagatcaaccctgcttctcatgaacatattcctaagattcaaagttccgagtac
tgctgcatcctccagctctcagatgaagttctggcgcacaacatattgtctcgcttatcg
ccaagagatgttgcatccatcggatcagtctgcactagaatgcatgagttgaccaagaat
gatcacctgagaaagatggtatgtcaaaacgcgtggggaagagacgtcactgtgaggctt
gagatgagcaccaagatgttaggatggggtcgtcttgcaagagagcttacaacccttgag
gcagcttcatggaggaagtttacagttggaggtcgtgttgagccttcccgttgcaacttc
agtgcctgtgctgttggtaatcgccttgtcctgtttggaggtgaaggagtcaacatgcag
ccaatggatgatacctttgtgctcaacctggaatctgcaaagcctgaatggcgccgtgtc
aaagtttcagcttctccacccggccggtgggggcacactctctcatggctgaatggctca
tggctagtggtctttggaggctgtggacagcaaggtttgctcaatgatgtctttgtcctt
gaccttgatgccaagcagcccacctggagggaggttgcaagcgagggcccaccattgccg
aggtcatggcacagttcatgtaccctggatggatcaaagcttgttgtctcaggggggtgc
actgaatccggtgtgctcctcagtgacacattcctgcttgacctcaccaaggaaaaacca
gcatggaaggagatcccaacatcctggtcaccaccatcccgcctcggccacaccttgtcc
gtctttggtaagaccaaactcttcatgtttggtgggttggcaaagagcggctctctccgg
ctacgctcctgtgatgcctacactatggacgctggtgaagacagcccacaatggaggcaa
ctggcgacaaccgggttcccgagcatcggtccacctccgaggctcgatcatgtcgcggtc
agcctcccctgtggacggataatcatattcggtggctccatcgctgggctgcactcgccc
tcacagctgttcctcctcgacccagcggaggagaagccgacatggaggattttgaacgtc
cctggccagccacccaagttcgcctggggtcatagcacatgcgtggttggcggcaccagg
gttcttgtcctgggtggccacactggggaggagtggattctcaatgagctccatgagctg
tgcctcgcgagcaggcccgacgaagatgagtga
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