Oryza sativa japonica (Japanese rice): 4350873
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Entry
4350873 CDS
T01015
Name
(RefSeq) ABC transporter F family member 5
Organism
osa
Oryza sativa japonica (Japanese rice)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_22
AAA_29
AAA_16
AAA_30
AAA_28
SRP54
AAA_14
AAA_15
AAA_23
ATP-synt_ab
DUF5906
AAA_24
NB-ARC
AAA_18
NACHT
MMR_HSR1
nSTAND3
AAA_25
T2SSE
RsgA_GTPase
ATPase_2
ORC-CDC6-like
Rad17
Motif
Other DBs
NCBI-GeneID:
4350873
NCBI-ProteinID:
XP_015617767
UniProt:
Q2R1J1
Q0IRR5
LinkDB
All DBs
Position
11:join(25179167..25179988,25180171..25180512,25180625..25180765,25180875..25181054,25181279..25181434,25181523..25181624,25181755..25181883,25182305..25182409,25182515..25182610)
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AA seq
690 aa
AA seq
DB search
MAAPPMELLSSKLLRSSLRLPPSPSLPSPSSRRLRRHAPIHCRLTSSTTTTTTQEEQSAA
DDLSSLLSTSTSDEPSSSKKKRSNSSSGASSIPTGVRLEGIAKSYKGVTVLRDVSWEVQR
GEKVGLVGVNGAGKTTQLRIIAGLEDPDAGAVVKAKDNMRIAFLSQEFEVCASRTVREEF
LAAFEEEMEVRSRLEKVQAALEGATEDMDLMGRLLDELDLLQRRSQDVDLGMVEVKIQKL
MPELGFAPEDADRLVASFSGGWQMRMSLGKILLQDPDLLLLDEPTNHVDLDTIEWLESYL
KTQEVPMVIISHDRAFLDQLCTKIVETEFGVSKTYKGNYSEYVLAKAIWVETQYAAWEKQ
QKEIEQTKELINRLGAGVNAGRASSEQKKLEKLEKEGLIEKPFQRKQLKIRFPERGQSGR
TVLTIRNLEFGFGEEKLFNNANLIVERGEKIAIIGPNGCGKSTLLKLILGMEKTQGGEVL
LGEHNVLPNYFEQNQAEALDLEKTVLDTVAEAAEDWKIDDIKGLLGRCNFRDDMLDRKVQ
FLSGGEKARLAFCKFLVTPSTLLILDEPTNHLDIPSKEMLEEAISEYTGTVITVSHDRYF
VKQIVNRVIEVKDQTIQDYQGDYNYYLERNLEARERELAREEELEEKAPKVKAKSKMSKA
EKIARKKQKMQAFQQSKQKSKSLKNAKRWK
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccacccatggagctcctctcctccaagctcctccgctcctccctccgcctc
cccccctccccttccctcccctccccctcctcccgccgcctccgccgccacgcccccatc
cactgccgcctcacctcctccaccaccaccaccaccacccaagaagagcagtccgccgcc
gacgacctctcctccctcctctccacctccacctccgacgagccctcctcctcgaagaag
aagcggtcgaatagcagcagcggcgcgtcgagcatcccgacgggggtgcggctggagggc
atcgccaagtcctacaagggggtgaccgtgctcagggacgtttcttgggaggtgcagcgc
ggcgagaaggtcggactcgtcggcgtcaacggcgccggcaagacgacccagctccgcatc
atcgccggcctcgaggaccccgacgccggcgccgtcgtcaaggccaaggacaacatgagg
atcgccttcctcagccaggagttcgaggtgtgcgcgtcgcgcaccgtcagggaggagttc
ctcgccgcgttcgaggaggagatggaggtgaggtcccgcctggagaaggtgcaggccgcg
ctggagggcgccaccgaggacatggacctcatggggcgcctcctcgacgagctcgacctg
ctgcagcggcggtcgcaggacgtcgacctcgggatggtcgaggtcaagatccagaagctc
atgcccgagctcgggttcgctcccgaggacgccgaccgcctcgtcgcctccttcagtggt
gggtggcagatgaggatgtccctcggcaagattcttcttcaggatcccgatttgctgctg
ctcgatgagccgaccaatcacgtcgatttggacaccattgagtggctggagagttacctc
aagacgcaggaagtgccgatggtcatcatttctcatgacagggctttcctggatcagttg
tgtaccaagatagtggaaactgaattcggcgtgtccaaaacgtacaagggaaactattcg
gaatacgttttggcgaaggcgatttgggtggagactcaatatgccgcatgggagaagcag
cagaaggagattgagcagacaaaggaactgataaacagacttggggctggagttaacgca
gggcgtgcatcgagtgagcagaagaaattggaaaagcttgaaaaggaaggattgattgag
aagcctttccaaaggaagcagttgaagatcagatttccagagcgtgggcaaagcggtaga
actgtattgacaataaggaatctcgaatttggatttggggaagagaaattgttcaataat
gcaaatctaatagttgagagaggtgaaaagatagccataattggccccaatggatgtggg
aaaagcactttacttaagcttattttggggatggagaagacacaaggaggcgaagtactt
cttggggagcataatgtattgcctaattatttcgagcaaaatcaggctgaagcacttgat
ttggagaaaactgtgctggatactgtagcagaagcagcagaggattggaaaattgatgat
atcaaaggtctccttggtcgttgcaattttagggatgatatgttggatagaaaggttcaa
ttcttaagtggtggagagaaggcgaggcttgccttctgcaagttcttggtgactccatct
actttattgatattggatgaaccaacaaatcaccttgatattccatcgaaagaaatgctt
gaggaggcaatttcagaatacacaggcactgttataacagtttctcatgaccggtatttc
gtaaagcaaattgttaacagagttattgaagtgaaagatcagactattcaggactatcaa
ggagattacaattattaccttgaaaggaatcttgaggccagagagagggaacttgcacgt
gaggaagagctcgaggagaaagcccccaaagtaaaggccaagtcaaaaatgtcaaaggca
gagaaaattgccagaaagaagcagaagatgcaggcattccagcaaagcaagcaaaaatcg
aaatcgctgaaaaacgcgaagaggtggaagtga
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