KEGG   Oryza sativa japonica (Japanese rice): 4350918
Entry
4350918           CDS       T01015                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit rpa49 isoform X1
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    4350918
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:osa03021]
    4350918
Transcription machinery [BR:osa03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     4350918
SSDB
Motif
Pfam: RNA_pol_I_A49
Other DBs
NCBI-GeneID: 4350918
NCBI-ProteinID: XP_015615172
LinkDB
Position
11:join(25861365..25861955,25862426..25862578,25863121..25863426,25864027..25864464)
AA seq 495 aa
MADHQPAASSPKRKKKHSKKPEDSNATVDDSLAAAASPSPKKKEKHSKKKREAIDATMAA
ASPKKKEKKHSKKQEDTNVPEKKREVVHVTVDASLTGAAAAGAAPVVAYFPTGYDPLAAG
GGRKGREAPRTRLFRHTKHPSRIELVVGAATGGGGGPDFVGRSYAGEAVLPQLTGYALGV
LDKASGTLKVVPIAANKILRLDPHLEVQKLAHSQHSGAVGEAVSSAGDADLKVQDITKAF
GTQKDKAKDIKWQSLNEQRNDPSAFMDLDLGNADTSVGANESQEPTVRNIPPYDPAADTS
ERAYLFDEIIPKSIRPHLVDIIGHFESGEISSKGYGSFVSNRVNKLQELQGEDKERLAWI
LSYITHLLSLLARNSSMSKRHRKENQATSGPVIPQYVYRKMVLMFTEPGSSALSTEKHEL
LINYILVLTLYADDFRSDPKDICEDLKMTRQMIKPYYDQLGCKSSSAGAFKSSVMTLPAP
LKFPKEATRRKRRRF
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggcggaccaccagcccgccgcctcctcccccaagaggaagaagaagcactccaagaag
ccggaggacagcaatgccaccgtcgacgactccctcgccgccgccgcctccccctccccc
aagaagaaggagaagcactccaagaagaagcgggaagccatcgatgccaccatggccgct
gcctcccccaagaagaaggagaagaagcactccaagaagcaggaagacaccaatgtcccc
gagaagaagcgggaagtcgtccatgtcaccgtggacgcctccctcaccggcgccgccgcc
gcgggcgcagcccccgtcgtcgcctacttcccgaccggctacgaccccctggccgccggc
ggcggcaggaagggtagagaggccccccgcacgaggctgttccgccacacgaagcaccca
tcccgcatcgagctcgtggtcggcgccgccactggtggcggcggagggccggacttcgtc
gggcggagctacgccggcgaggccgtgctgccgcagctcactggctacgcgctcggtgtc
ctcgacaaggcctccggcaccctcaaggtcgtccccatcgccgccaacaagattcttagg
ctagatccgcaccttgaagtgcagaaactggcgcattcgcagcactctggggcagtaggg
gaggcagtatcatcagcaggagatgctgacttgaaggtacaggatattaccaaggcgttt
ggaacccagaaagacaaggccaaggatattaagtggcagtcattaaatgaacaaaggaat
gatccttctgcttttatggaccttgaccttgggaatgctgataccagtgtgggtgctaat
gaaagtcaagaaccaactgtacggaacattccaccttatgatcctgcagcagatacatca
gaaagggcatatctttttgatgagattattccaaagagtataaggccgcaccttgtggat
attataggacattttgagtcaggagaaatttcttcaaaaggctatgggagttttgtgtca
aatcgtgttaataaattacaggagcttcagggtgaagataaggagaggcttgcttggata
ctgtcctacatcacacatctcctatccctgctggcacggaacagctccatgtccaagcgg
cacagaaaggaaaaccaggctaccagtggaccagtgatcccacagtatgtatatcgtaag
atggtgctaatgtttacggaaccaggatctagcgccttgtcaacagagaaacacgagctt
ctgatcaactacattctcgtactcacgctctacgctgatgacttcagatccgaccctaag
gatatatgtgaagacctgaaaatgacccgccagatgattaaaccatattatgaccagctg
ggatgcaaatcttcgtcggccggtgcatttaaatcctctgtaatgacacttccagctccc
ctcaagttcccaaaagaagctacaaggagaaagcgacgaaggttctga

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