Oryza sativa japonica (Japanese rice): 4350961
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Entry
4350961 CDS
T01015
Name
(RefSeq) vacuolar protein sorting-associated protein 26A
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4350961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4350961
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
4350961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps26
Arrestin_N
Motif
Other DBs
NCBI-GeneID:
4350961
NCBI-ProteinID:
XP_015618019
UniProt:
Q2R0X0
A0A8J8YHU0
LinkDB
All DBs
Position
11:join(26594911..26594913,26594989..26595063,26595169..26595243,26595461..26595533,26595892..26595936,26596325..26596436,26596567..26596633,26596937..26596981,26598065..26598120,26598207..26598382,26598511..26598698)
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AA seq
304 aa
AA seq
DB search
MNYIIGAFKAPCDVFITFADERSRKQVAIKKDNGKTLMVPAFQSLETIAGEVSVAPVPGK
RVEHQGVKIELLGQIELYHERGHFYDFTSLVRELEVAGEIYERKTYPFEFSTVEMPYESY
NGTNVRLRYILKVTIGRPYATSVVECRDFCVRNYTPLPSINNSIKMEVGIEDCLHIEFEY
SKSKYHLKDVIVGKIYFLLVRIKIKNMELEIRRRESTGSGPGTYIETETLAKFELMDGAP
VRGESIPVRLFLTPYELTPTYRNINNKFNVKYYLNLVLVDEEDRRYFKQQEITMYRLQET
PQSS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaattacatcatcggagcattcaaggcgccctgcgacgtcttcatcaccttcgccgat
gagaggagccggaagcaggtggcgatcaagaaggataacgggaagacgttgatggtgccg
gccttccagagcctggagactattgcaggagaggtgtcggtagcgcccgttccaggtaaa
agggtggagcaccaaggtgtcaagattgagctgctgggtcagatagagctgtaccatgag
agaggtcacttctatgacttcacttcgttagtgcgagagttagaggttgctggtgaaatc
tatgaaaggaagacttatccatttgaattctctactgttgagatgccttatgagtcgtat
aacggaacaaatgtcagattgaggtacatcctgaaagttacaattggcagaccatatgct
actagtgttgtggaatgtcgagatttctgtgtaaggaattacactcctcttccttcaatt
aacaatagcatcaagatggaagttggaattgaagattgtttgcatattgaatttgagtac
agcaaaagcaagtaccatctcaaggatgtgatcgtgggaaaaatctattttcttctagtc
agaataaagataaagaacatggagcttgagattcgtcggcgggaatcaacaggatctggg
cctggcacatatattgagactgagacacttgcaaagtttgagttgatggatggcgctccc
gtaagaggtgagtctattccggtaagactcttcttgacaccatatgagttgaccccgact
taccgcaacataaacaacaagttcaatgtcaagtactacctgaacctggttcttgttgac
gaggaagaccggaggtacttcaagcagcaagagatcacaatgtaccgccttcaagaaact
ccgcaatcttcataa
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