KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4350981
Entry
4350981           CDS       T01015                                 
Name
(RefSeq) splicing factor U2af large subunit A
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4350981
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    4350981
Spliceosome [BR:osa03041]
 Complex A
  U2 snRNP components
   U2 related factors
    4350981
 Complex B
    4350981
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded BUD22
Other DBs
NCBI-GeneID: 4350981
NCBI-ProteinID: XP_015617576
UniProt: Q2R0Q1
LinkDB
Position
11:complement(25148712..25153445)
AA seq 574 aa
MAEHEEQPYEGNGNGGDPAPASAYAEYPAPEGSPPAAAAKPTGFSDGATDGGRSQHETQP
HDGRSSKSRERERERDKDKERDRDRDRDRRDRDRGDKDRDRDRHREHRDRSERREHHDRE
RSDDRDRRRGHDSERRRDRDRDGHRRHRSRSRSPSKGRDRRSRSRSRSRSSKRVSGFDQG
PQAAIPALAAGAAPGQVPVVAPAISGMLPNMFNLTQTPFTPLVIQPQAMTQQATRHARRV
YVGGLPPTANEHTVAVYFNQVMAAVGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASN
AMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLNLAAVGLTPGSAGGLEGPDRI
FVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALN
GIKMGDKTLTVRRANQGASQPRPEQESMLLHVQQQAQMQKLMFQVGGGALPTKVVCLTQV
VSPDELRDDEEYEDIVQDMREEGCRYGNLVKVVIPRPDPSGAPVAGVGRVFLEFADVESS
TKAKNGMHGRKFANNQVVAVFYPEDKFAEGQYDG
NT seq 1725 nt   +upstreamnt  +downstreamnt
atggcggagcacgaggagcagccctacgagggcaacgggaacggcggcgacccggccccc
gcctccgcgtacgctgagtaccctgcgcccgaggggtccccgcccgccgccgccgccaag
cccaccggcttctccgatggcgccaccgacggcggccgttctcagcacgagacacagcca
catgatggcaggtcctcaaagtctagagagagggaaagagaacgggacaaggacaaggaa
cgcgacagagaccgtgatagagaccgaagggaccgcgaccgtggtgacaaggacagggac
cgtgatcgccacagggagcaccgcgatagaagcgaaagaagggaacaccacgatcgtgaa
cgttctgatgaccgtgatcgacgccggggccatgattctgaaaggagaagagaccgtgac
agagatggtcaccgcaggcatcgatctcgctcccgctccccttcaaagggtcgtgatcgc
agatctagatctcgctcacgctctcgatctagcaagcgcgtgagtggatttgaccaggga
ccacaagcagccattcctgcgcttgctgctggagcagccccaggtcaggtacctgttgtg
gcccctgctatttctgggatgcttccgaacatgttcaatttgactcaaaccccgttcact
ccgcttgttattcagccacaagctatgacacaacaggctactcgacatgctaggcgtgtt
tatgttggtggacttcctccaactgctaatgagcatactgttgctgtatacttcaatcaa
gttatggctgctgttggtggaaatacagctggtccaggtgatgctgttcttaatgtctac
ataaaccatgataagaaatttgcatttgtggagatgaggtctgtggaggaagcaagcaat
gcaatggccttggatggtataatgtttgagggagcacctgtgaaggttagaaggccaaca
gactataatccttccctagcagctgcattgggtccaagccagccaaaccccaacctcaat
cttgctgctgttggcttaacacctggctcagctggaggtttagaaggtcctgaccgcatt
tttgtgggtgggctgccctattacttcacagaagctcaagtcagggagttgctcgaatcc
tttggacctctgcgtggttttgatcttgtgaaggacagagaaactggaaactcgaagggc
tatgctttctgtgtataccaggatcttaatgtcacggacattgcctgtgctgctcttaat
ggtatcaagatgggagacaagaccctcactgttaggcgagctaaccaaggagcttctcaa
cctaggccagagcaagaaagcatgctcctgcatgtacaacaacaggcgcaaatgcagaaa
ctcatgttccaagttggagggggagcactgcctacaaaggtggtatgcctgacccaagtg
gtttcaccagatgaactgagggatgatgaggagtatgaggacatcgtgcaagacatgagg
gaagaagggtgcagatacggtaacctggtgaaagttgtgatcccgcgacctgatcccagc
ggtgctcctgttgctggagttgggagggtgtttttggaatttgcagatgtagagagctcg
accaaggcgaagaatgggatgcacgggaggaagtttgccaacaaccaggtggtggctgtc
ttctaccctgaggacaagttcgctgaagggcaatacgacggttga

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